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7YOJ

Structure of caspi with guide rna and target dna

PDB DOI: 10.2210/pdb7yoj/pdb

Classification: RNA BINDING PROTEIN/DNA/RNA
Organism(s): Armatimonadetes Bacterium , Armatimonadota Bacterium

Deposited: 2022-08-01
Deposition Author(s): Li, C.P. , Liu, J.J. , Wang, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.36 Å

7yoj
Literature

Structure of caspi with guide rna and target dna

Li, C.P. , Liu, J.J. , Wang, J.

Primary Citation of Related Structures: 7YOJ


Proteins
Molecule Chains Sequence Length Organism Sequence
CasPi A 867 Armatimonadetes Bacterium , Armatimonadota Bacterium MAKATKEVKSKRVEALRQVAYQRLERLERKAQKIGAHLRKPGKAADLQSLHYLLHKVEVEYHDIARNLEKDPTWTPKPKMRREKRAIVPESGPAAPLPTTAKGEPGRPANRHIPPPVPLDSARIPEDQQSMGQGSGGRSWCSAPFVEVKLPPTQWSNVREKLLKFRIEDDADIVRRWAEAKFGSIETARDGLRASAEIGTSPDVWRSFISRAISNGKKDFEPLLSLDDDELTADATAERVVRRWHQIDWVGRMLDSILETVPSGVSKDTFRSRVESRLKTFHSSVNSFELKKRKDGTVERKRKHTNPQFPYLSPSAVSIDPDVVTMEAVELLQMQPEERFAKDPNDANGRMRLRVLQAELGKARREALGRRGEKAPPWSGRKVFRGTTTRKREACLVWDKEAQADGLYFALVMSGGPKIDDKRFVYMDGQPLQSDWQLHNGVAGKAKSCRAMPLILKHDFLRWYHRHIKNHDVNAPLEKRCVHTTTQFVFVEPDEKKGLQPRLFIRPVFKFYDPVYEVPDSHSIDKKPDCRYLIGIARGVNYPYRAAVYDCETNSIIADKFVDGRKADWERIRNELAYHQRRRDLLRNSRASSAAIQREIRAIARIRKRERGLNKVETVESIARLVDWAEENLGKCNYCFVLADLSSNLNLGRNNRVKHIAAIKEALINQMRKRGYRFKKSGKVDGVREESAWYTSAVAPSGWWAKKEEVDGAWKADKTRPLARKIGSYYCCEEIDGLHLRGVLKGLGRAKRLVLQSDDPSAPTRRRGFGSELFWDPYCTELCGHAFPQGVVLDADFIGAFNIALRPLVREELGKKAKAVDLADRHQTLNPTVALRCGVTAYEFVEVGGDPRGGLRKILLNPAEAVI

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*CP*GP*GP*GP*AP*TP*GP*CP*CP*CP*AP*G)-3') c 12 NA CGGGATGCCCAG
DNA (30-MER) d 30 NA GTTCACCAGGGTGTCGCCCTGGGCATCCCG
RNA (174-MER) b 174 NA GUCUGCCGAAGACGCCGCACGGAGCCUGGGCCGGAAUCGUAGAUCGAACGCGGCAUCGAAGCCCUGCAGCCCUUCGGGGCCAAGGCGGCGCAGCAAGCCUCUUUCAGGCGGCAGAGUCCUUUAGAGUGUGAGAGACACUCUAAAGGAAUGAAAGAGGGCGACACCCUGGUGAAC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-08-01
Deposition Author(s): Li, C.P. , Liu, J.J. , Wang, J.