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7YGB

Cryo-em structure of tetrahymena ribozyme conformation 3 undergoing the second-step self-splicing

PDB DOI: 10.2210/pdb7ygb/pdb

Classification: RNA
Organism(s): Maackia Amurensis , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2022-07-11
Deposition Author(s): Greg, P. , Li, S. , Michael, Z.P. , Zhang, K. , Zhang, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.62 Å

7ygb
Literature

Cryo-em structure of tetrahymena ribozyme conformation 3 undergoing the second-step self-splicing

Greg, P. , Li, S. , Michael, Z.P. , Zhang, K. , Zhang, X.

Primary Citation of Related Structures: 7YGB


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*CP*CP*CP*UP*CP*UP*UP*AP*AP*CP*C)-3') b 11 NA CCCUCUUAACC
RNA (393-MER) n 393 NA GGUUUGGAGGGAAAAGUUAUCAGGCAUGCACCUGGUAGCUAGUCUUUAAACCAAUAGAUUGCAUCGGUUUAAAAGGCAAGACCGUCAAAUUGCGGGAAAGGGGUCAACAGCCGUUCAGUACCAAGUCUCAGGGGAAACUUUGAGAUGGCCUUGCAAAGGGUAUGGUAAUAAGCUGACGGACAUGGUCCUAACCACGCAGCCAAGUCCUAAGUCAACAGAUCUUCUGUUGAUAUGGAUGCAGUUCACAGACUAAAUGUCGGUCGGGGAAGAUGUAUUCUUCUCAUAAGAUAUAGUCGGACCUCUCCUUAAUGGGAGCUAGCGGAUGAAGUGAUGCAACACUGGAGCCGCUGGGAACUAAUUUGUAUGCGAAAGUAUAUUGAUUAGUUUUGGAGU
RNA (5'-R(*UP*CP*G)-3') a 3 NA UCG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-07-11
Deposition Author(s): Greg, P. , Li, S. , Michael, Z.P. , Zhang, K. , Zhang, X.