7Y8A
Cryo-em structure of cryptophyte photosystem i
PDB DOI: 10.2210/pdb7y8a/pdb
Classification: PHOTOSYNTHESIS Organism(s): Chroomonas Placoidea
Deposited: 2022-06-23 Deposition Author(s): Li, K. , Liu, L.N. , Zhang, Y.Z. , Zhao, L.S.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.71 Å
Cryo-em structure of cryptophyte photosystem i
Li, K. , Liu, L.N. , Zhang, Y.Z. , Zhao, L.S.
Primary Citation of Related Structures: 7Y8A
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| ACPI-1 | 1 | 222 | Chroomonas Placoidea | MLRLSLLAAIVACASAFAPTSLPMGSMRKAATKGPSMQLFGAGKLQGEGVTAIPFAGRPKTPAFDGTWAGDTGFDPLTISAWLDIRFLREAELKHCRVAMLAAAGAIAQDAFTFPGTVETFGTGKMTALHDAAVKTGTMGQMLVWIGFAEIFSTAAILQWYTDGSTRKPGDFGFDPLGFSKGKDAARLELCELKNGRLAMIAIGGMIHHYLITGKGPLELLP |
| ACPI-13 | A | 215 | Chroomonas Placoidea | MIRAVILAGCVAAASAFAPGASLVGARAATRAVSAAGPKMQMSPSIPFLKKPDALDGTAAGDIGFDPLGFSSLADIKFLQEAEIKHCRIAMLAAAGSIAQDIFTFPGYSALTGGAKMTAAHDKLVATGTMGQILFWVSFAEVFGTVALFDTLDGKRAPGDFKFDPLGMGKKNMADMQLKEIKNGRLAMLGIAGMTHGYFISGKGPLELLGNFPTA |
| ACPI-14 | B | 218 | Chroomonas Placoidea | MFRAALLLACLASASAFAPGSLMMPKSATRAAISRGPRMQANDDLAVPFLERPPMLDGSYAGDIGFDPVGFSNYFDLRWLREAELKHGRVCMLGVVGFLVQEFVTLPMFSNGVTPVDDFFVVPATGLWQIFFTIGFVEAFSNGFKLTPSDMFADDRAPGDLGFDPLGCGKDPAALARRQLVEVKNGRLAMIAFGGMLHQQLLTKQGVIEQLTNFKAIM |
| Photosystem I iron-sulfur center | C | 81 | Chroomonas Placoidea | MSHAVKVYDTCIGCTQCVRACPCDVLEMVSWDGCKAGQIASAPRTEDCIGCKRCETACPTDFLSVRVYLGGETTRSMGLAY |
| Photosystem I reaction center subunit II | D | 141 | Chroomonas Placoidea | MSETLNLQIPSPTFEGSTGGWLRAAEVEEKYAITWTSGKEQVFEMPTGGAAIMRKGENLLYLARKEQCLALGTQLKTGFKITDYKIYRIFPSGEVQYLHPKDGVFPEKVNAGRIGVGNVSHSIGKNLNPSQIKFTNKSFNG |
| Photosystem I reaction center subunit IV | E | 64 | Chroomonas Placoidea | MVKRGSQVRILRKESYWYQDVGTVATIDTSGIRYPVVVRFEKVSYSGVNTNNFSLDEVVEVVKK |
| Photosystem I reaction center subunit III | F | 183 | Chroomonas Placoidea | MKNWVSLVLIFSIVTTPYVAHADVAGLTPCKDSKDFQRRLDGSVKKLKTRLAKYEKGTPPALALEKQIERTQARFERYGKAGLLCGTDGLPHLITDGRWSHSGEFVIPGLFFLYIAGWIGWVGRSYVLFARESDKPTEKEIILDVPAALSFVSTGFIWPVSAFKEFTSGNLIADESEITVSPR |
| Photosystem I reaction center subunit VIII | I | 36 | Chroomonas Placoidea | MTAAYLPSILVPLIGLIFPGFVMGFAFIYIEQEEIA |
| Photosystem I reaction center subunit IX | J | 42 | Chroomonas Placoidea | MDSNFLKYLSTAPVLLTVWLSFTAGLVIEANRFFPDMLYFPM |
| Photosystem I reaction center subunit PsaK | K | 87 | Chroomonas Placoidea | MNADLLLAVVPQTAAWSAKTCSVMVISNLLCIVAGRYVIQVKGSGPSLPLTGSFSNFGLPELLATTSLGHIVGSGAILGLSYVGLLS |
| Photosystem I reaction center subunit XI | L | 153 | Chroomonas Placoidea | MAQFVKPYNDDPFVGNLATPVSTSSFTRSFLSNLPAYRSGLSPLLRGLEIGMTHGYFLVGPFYKLGPLRNSDVALISGLFSSIGLIIILAACLAIYGVVSFNEDDNTDSLQTSRGWKQFTSGWLVGSIGGASFAYILISNIVFLQTSGLNLIK |
| ACPI-2 | 2 | 216 | Chroomonas Placoidea | MLRVALIAAILASASAFAPMGSLGLVKSARSGAAISPRMQSGDFSAAVPFLKRPSNLDGTLAGDVGFDPLGFSDVFDLRVLREAELKHGRFAMLAVLGFLVQEVYTFPFFPKMAPVDAHDYFVTQGGGSQIIFWISFVEIFGVVALFELIQGKRDAGDFAFDPLGLGKDEATLARYKVAEIKHARLAMIAIGGFIHQFWVTKQTVLEQLGNFQSLA |
| Photosystem I reaction center subunit XII | M | 30 | Chroomonas Placoidea | MISDTQIFVALILALVSLVLAIRLGTALYQ |
| PsaO | O | 154 | Chroomonas Placoidea | MKVAFLVLLAAATANAFAPTAAFLPKAHGIAASKPAMALRAAPRAVAKPLAVQAKFEISDGVEFDLNPLVLAISFLGWSLPGLLPSNIPLYGGKGLTTALFAEIGEHLQTFPAPPPIGDPFWVILFIWHSGLFATMIFGTIGYNGYGPKSTTKY |
| PsaR | R | 133 | Chroomonas Placoidea | MVRALCFLALIASAAAFSTAPGLALRSSVRPATSTKTPMKMAGYSPVPSPDNTKETYWETKAPSSQVLGIGKDVSSGNYIVASVVAAVVGAACTGQCIPLTVSPNPVFILGSFLLPYSWALHVAAWIQRNNGK |
| Unk1 | X | 164 | Chroomonas Placoidea | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| ACPI-S | Z | 242 | Chroomonas Placoidea | MAQAAPPSKLPENMAKKNALKVNKEQWGIEEAIKVDAKAAAPAPKAAAPAPKKAAPKKGAAPAEATVGFSGVPSDFCRPAPTAFPAEPAGMTVFGARGPRAEGHRDKFGSRHAAVSLACAALLWQPISQAGMYSIDSGSLAKKSFSEMEVPGFGDAKKVPTIESFFPFTKNGFDASPALFGKDSMIVFENPLGKCGAYASSCHTFLDEMGDMLKATPQEMPRSKAAPTYSFPWMYDHAAWKK |
| ACPI-3 | 3 | 236 | Chroomonas Placoidea | MLRTLALLAAVASASAFTAAPMLSTSTRAKAVSSVSGMRMQEKSASVPFLSKPEKLDGSMAGDVGFDPLGISYFIDVKWLREAELKHGRICMLATAGILVQEVIHLPGPAFSSKFALDAWSTAPRGGMVQILIAIGLIEMVSNRFAITATDMFANPNRKPGDLGFDPLSLGANPATRAKYELSEVIHGRAAMMGLSGMIHQMIVSKQPVIDQLLNFKPVDASFKLGGAAGTMGMGI |
| ACPI-4 | 4 | 217 | Chroomonas Placoidea | MLRSLALLCLVGAASAFAPGAAPLVRSNTRAAIARGPRMQEMSKAIPFAERPAKLDGKIPGDVGFDPLGFSDYYDLKYLREAEIKHGRICMLGALGWLFPEFAKLPQFASLSTNPLKAATELGPAGWAQIFIFVGALESFSYEKIYYGDSAPGDLGFDPLRLGKNPVSRAHYEVAEIKNGRLAMIGLGGMIHHSLLTKQGAIEQIMSQNFYPSGFPQ |
| ACPI-5 | 5 | 229 | Chroomonas Placoidea | MLRLSLLAACIAAASAFAPVALPGMGMRAATRRPAVSMQLWEDGKVQGKGLKAIPFSDPPESLPSDMVGYVGFDPLGFSTLFDIKFLREAELKHGRAAMLAAAGAIAQDIFTFPGVTSVIGDAKMTGAHDAFLKAAADGNPKANAMSQLFVWIGFFELVSMPALFETLNGGERAPGDFYFDPLGLGKGSGRARMELAEIKNGRLAMIGIGGMVHHYLLTGKGPIGTIVG |
| ACPI-6 | 6 | 215 | Chroomonas Placoidea | MLRVALISALVASASAFAPTALPAARASARAVSAGPKMQMSPSVPFLKRPVALDGSMVGDVGFDPLGLSSVGDIKFLREAELKHCRLAMLAAAGSMAQDLYTFPGVDKVIGDAKMTAVHDKLVSQGAMGQLLVWIGFAEVFATMALFETLDGKRAPGDFKFDPLGFGKNPEALKRYQLAEIKNGRLAMLGFGGMVHGYFVTGKGPLELLTNFQAA |
| ACPI-7 | 7 | 230 | Chroomonas Placoidea | MLRVALLSALVASAAAFTAPAALFKAPTRSSRAMSVKMQDNSAAVPFLSRPAALDGSMVGDVGFDPLGFTGKYDLKWLREAELKHGRVAMLASLGCLVQEFIHLPFEATSNPVASEAFFQVPSGGLWQIFTVIGVIEHVSNGFNMSGSTMFKSGRAPGNLGFDPLNFGKNPTARARYELAELKNGRLAMLGFAGMIHGCFITGKGPLAALTSLDWHQQIGRASCRERVGC |
| ACPI-8 | 8 | 227 | Chroomonas Placoidea | MFARTLLLAACAASASAFAPGSFAPMGLRGSTAAVSRPMARAGLSSVSMAANPMTNAIEEFAESAPELASRGLGVTTNAERWNGRHAMFGIFAIVMTAYFKGHGLIPDAEKILDVNQWGPLASAGQGQGITNERAIILIAHVHVLVVSVLAAFAPFQFQDTLVKEKGYTPEAPAGIIPPFKTGLTPEAELINGRLAMLGVISIIMASIFTGNSVIDVVNLGLGKILF |
| ACPI-12 | 9 | 220 | Chroomonas Placoidea | MFRALLVLAAVAGASAFTAPAVLPGRSTARAATKGPSMQLYKEGSLQGKGVNCIPIFKRPDSLKGDAVGDMGFDPFGFSSWVDMNYVREAEIKHGRIAMLAFAGIVVEVLGIKAPGAGKILGSSTDIFEIHNAAVEKGSMGQILLWCGFFEMTAGLPAMQQMLEGSGRTPGDFGFDPLGLGKKDFAQMQIKEIQNGRLAMLAVSGMVHHALINGKVQGLP |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-06-23 Deposition Author(s): Li, K. , Liu, L.N. , Zhang, Y.Z. , Zhao, L.S.