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7Y5D

Cryo-em structure of f-atp synthase from mycolicibacterium smegmatis (rotational state 3) (backbone)

PDB DOI: 10.2210/pdb7y5d/pdb

Classification: HYDROLASE
Organism(s): Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165)

Deposited: 2022-06-16
Deposition Author(s): Grueber, G. , Saw, W.-G. , Wong, C.F.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 7.3 Å

7y5d
Literature

Cryo-em structure of f-atp synthase from mycolicibacterium smegmatis (rotational state 3) (backbone)

Grueber, G. , Saw, W.-G. , Wong, C.F.

Primary Citation of Related Structures: 7Y5D


Proteins
Molecule Chains Sequence Length Organism Sequence
ATP synthase subunit alpha A 548 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) MAELTISAADIEGAIEDYVSSFSADTEREEIGTVIDAGDGIAHVEGLPSVMTQELLEFPGGVLGVALNLDEHSVGAVILGEFEKIEEGQQVKRTGEVLSVPVGDAFLGRVVNPLGQPIDGQGDIAAETRRALELQAPSVVQRQSVSEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQREAWLTGDPKQQVRCVYVAIGQKGTTIASVKRALEEGGAMEYTTIVAAPASDAAGFKWLAPYTGSAIGQHWMYNGKHVLIVFDDLSKQADAYRAISLLLRRPPGREAFPGDVFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAFIPTNVISITDGQCFLESDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQYRELEAFAAFASDLDAASKAQLDRGARLVELLKQPQYSPLAVEEQVVAIFLGTQGHLDSVPVEDVQRFESELLEHVKASHSDIFDGIRETKKLSEEAEEKLVSVINEFKKGFQASDGSSVVVSENAEALDPEDLEKESVKVRKPAPKKA
ATP synthase subunit alpha B 548 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) XXXXXXXXXXXXXXXXXXXXXXSADTEREEIGTVIDAGDGIAHVEGLPSVMTQELLEFPGGVLGVALNLDEHSVGAVILGEFEKIEEGQQVKRTGEVLSVPVGDAFLGRVVNPLGQPIDGQGDIAAETRRALELQAPSVVQRQSVSEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQREAWLTGDPKQQVRCVYVAIGQKGTTIASVKRALEEGGAMEYTTIVAAPASDAAGFKWLAPYTGSAIGQHWMYNGKHVLIVFDDLSKQADAYRAISLLLRRPPGREAFPGDVFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAFIPTNVISITDGQCFLESDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQYRELEAFAAFASDLDAASKAQLDRGARLVELLKQPQYSPLAVEEQVVAIFLGTQGHLDSVPVEDVQRFESELLEHVKASHSDIFDGIRETKKLSEEAEEKLVSVINEFKKGFQASDGSSVVVSENAEALDPEDLEKESVKVRKPAPKKA
ATP synthase subunit beta D 481 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) MHHHHHHTATAEKTAGRVVRITGPVVDVEFPRGSVPELFNALHAEITFGALAKTLTLEVAQHLGDSLVRCISMQPTDGLVRGVEVTDTGASISVPVGDGVKGHVFNALGDCLDDPGYGKDFEHWSIHRKPPAFSDLEPRTEMLETGLKVVDLLTPYVRGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLKDTALVFGQMDEPPGTRMRVALSALTMAEFFRDEQGQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYVPADDYTDPAPATTFAHLDATTELSRAVFSKGIFPAVDPLASSSTILDPAIVGDEHYRVAQEVIRILQRYKDLQDIIAILGIDELSEEDKQLVNRARRIERFLSQNMMAAEQFTGQPGSTVPLKETIEAFDKLTKGEFDHLPEQAFFLIGGLDDLAKKAESLGAKL
ATP synthase subunit c 4 86 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) MDLDPNAIITAGALIGGGLIMGGGAIGAGIGDGIAGNALISGIARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPGLQ
ATP synthase subunit c 5 86 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) MDLDPNAIITAGALIGGGLIMGGGAIGAGIGDGIAGNALISGIARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPGLQ
ATP synthase subunit c 6 86 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) MDLDPNAIITAGALIGGGLIMGGGAIGAGIGDGIAGNALISGIARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPGLQ
ATP synthase subunit c 7 86 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) MDLDPNAIITAGALIGGGLIMGGGAIGAGIGDGIAGNALISGIARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPGLQ
ATP synthase subunit c 8 86 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) MDLDPNAIITAGALIGGGLIMGGGAIGAGIGDGIAGNALISGIARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPGLQ
ATP synthase subunit c 9 86 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) MDLDPNAIITAGALIGGGLIMGGGAIGAGIGDGIAGNALISGIARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPGLQ
ATP synthase subunit c 1 86 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) MDLDPNAIITAGALIGGGLIMGGGAIGAGIGDGIAGNALISGIARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPGLQ
ATP synthase subunit c 2 86 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) MDLDPNAIITAGALIGGGLIMGGGAIGAGIGDGIAGNALISGIARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPGLQ
ATP synthase subunit c 3 86 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) MDLDPNAIITAGALIGGGLIMGGGAIGAGIGDGIAGNALISGIARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPGLQ
ATP synthase subunit alpha C 548 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) XXXXXXXXXXXXXXXXXXXXXXSADTEREEIGTVIDAGDGIAHVEGLPSVMTQELLEFPGGVLGVALNLDEHSVGAVILGEFEKIEEGQQVKRTGEVLSVPVGDAFLGRVVNPLGQPIDGQGDIAAETRRALELQAPSVVQRQSVSEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQREAWLTGDPKQQVRCVYVAIGQKGTTIASVKRALEEGGAMEYTTIVAAPASDAAGFKWLAPYTGSAIGQHWMYNGKHVLIVFDDLSKQADAYRAISLLLRRPPGREAFPGDVFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAFIPTNVISITDGQCFLESDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQYRELEAFAAFASDLDAASKAQLDRGARLVELLKQPQYSPLAVEEQVVAIFLGTQGHLDSVPVEDVQRFESELLEHVKASHSDIFDGIRETKKLSEEAEEKLVSVINEFKKGFQASDGSSVVVSENAEALDPEDLEKESVKVRKPAPKKA
ATP synthase subunit beta E 481 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) MHHHHHHTATAEKTAGRVVRITGPVVDVEFPRGSVPELFNALHAEITFGALAKTLTLEVAQHLGDSLVRCISMQPTDGLVRGVEVTDTGASISVPVGDGVKGHVFNALGDCLDDPGYGKDFEHWSIHRKPPAFSDLEPRTEMLETGLKVVDLLTPYVRGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLKDTALVFGQMDEPPGTRMRVALSALTMAEFFRDEQGQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYVPADDYTDPAPATTFAHLDATTELSRAVFSKGIFPAVDPLASSSTILDPAIVGDEHYRVAQEVIRILQRYKDLQDIIAILGIDELSEEDKQLVNRARRIERFLSQNMMAAEQFTGQPGSTVPLKETIEAFDKLTKGEFDHLPEQAFFLIGGLDDLAKKAESLGAKL
ATP synthase subunit beta F 481 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) MHHHHHHTATAEKTAGRVVRITGPVVDVEFPRGSVPELFNALHAEITFGALAKTLTLEVAQHLGDSLVRCISMQPTDGLVRGVEVTDTGASISVPVGDGVKGHVFNALGDCLDDPGYGKDFEHWSIHRKPPAFSDLEPRTEMLETGLKVVDLLTPYVRGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLKDTALVFGQMDEPPGTRMRVALSALTMAEFFRDEQGQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYVPADDYTDPAPATTFAHLDATTELSRAVFSKGIFPAVDPLASSSTILDPAIVGDEHYRVAQEVIRILQRYKDLQDIIAILGIDELSEEDKQLVNRARRIERFLSQNMMAAEQFTGQPGSTVPLKETIEAFDKLTKGEFDHLPEQAFFLIGGLDDLAKKAESLGAKL
ATP synthase gamma chain G 307 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) MAATLRELRGRIRSAGSIKKITKAQELIATSRIAKAQARVEAARPYAAEITNMLTELAGASALDHPLLVERKQPKRAGVLVVSSDRGLCGAYNANVLRRAEELFSLLRDEGKDPVLYVVGRKALGYFSFRQRTVVESWTGFSERPTYENAREIADTLVNAFMAGADDEGDDAGADGILGVDELHIVFTEFRSMLSQTAVARRAAPMEVEYVGEVETGPRTLYSFEPDPETLFDALLPRYIATRVYAALLEAAASESASRRRAMKSATDNADDLIKALTLAANRERQAQITQEISEIVGGANALAGSK
ATP synthase epsilon chain H 121 Thermoplasma Acidophilum (Strain Atcc 25905 / Dsm 1728 / Jcm 9062 / Nbrc 15155 / Amrc-C165) MADLNVEIVAVERELWSGPATFVFTRTTAGEIGILPRHIPLVAQLVDDAMVRVEREGEDDLRIAVDGGFLSVTEETVRILVENAQFESEIDADAAKEDAASDDERTAAWGRARLRALGQID
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-06-16
Deposition Author(s): Grueber, G. , Saw, W.-G. , Wong, C.F.