Cryoem structure of klebsiella phage kp9 tail complex applied with c6 symmetry
PDB DOI: 10.2210/pdb7y1c/pdb
Classification: VIRUS Organism(s): Klebsiella Phage Kp9
Deposited: 2022-06-08 Deposition Author(s): Huang, L. , Xiang, Y.
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
phage connector protein | A | 535 | Klebsiella Phage Kp9 | MAEVKLEGFAEEGAKAVYDRLKNDRQPYETRAESCAQYTIPSLFPKDSDNASTDYTTPWQSVGARGLNNLASKLMLALFPMQSWMKLTISEYEAKNLLGDAEGLAKVDEGLSMVERIIMNYIESNSYRVTLFECLKQLCVAGNALLYLPEPEGYTPMKLYRLNSYVVQRDAFGNVLQIVTLDKIAFNALPEDVRSQVEAAQGEQKEDAEIDVYTHVYLNEAGDGYSKYEEVAEEVVPGSEAEYPLEECPYIPVRMVRIDGESYGRSYVEEYLGDLKSLENLQESIVKMAMITAKVIGLVDPAGITQVRRLTAAQSGAFVPGRKQDIEFLQLEKSGDFTVAKNVSDTIEARLSYAFMLNSAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLVRVLLKQLQATQQIPELPKEAVEPTISTGLEAIGRGQDLDKLERCIAAWSALKALEGDDDLNLANLKLRIANAIGLDTAGMLLTQEQKNALMAQQGAQIATQQGAAALGQGMAAQATASPEAMAAAADSVGMQPGM |
phage connector protein | L | 535 | Klebsiella Phage Kp9 | MAEVKLEGFAEEGAKAVYDRLKNDRQPYETRAESCAQYTIPSLFPKDSDNASTDYTTPWQSVGARGLNNLASKLMLALFPMQSWMKLTISEYEAKNLLGDAEGLAKVDEGLSMVERIIMNYIESNSYRVTLFECLKQLCVAGNALLYLPEPEGYTPMKLYRLNSYVVQRDAFGNVLQIVTLDKIAFNALPEDVRSQVEAAQGEQKEDAEIDVYTHVYLNEAGDGYSKYEEVAEEVVPGSEAEYPLEECPYIPVRMVRIDGESYGRSYVEEYLGDLKSLENLQESIVKMAMITAKVIGLVDPAGITQVRRLTAAQSGAFVPGRKQDIEFLQLEKSGDFTVAKNVSDTIEARLSYAFMLNSAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLVRVLLKQLQATQQIPELPKEAVEPTISTGLEAIGRGQDLDKLERCIAAWSALKALEGDDDLNLANLKLRIANAIGLDTAGMLLTQEQKNALMAQQGAQIATQQGAAALGQGMAAQATASPEAMAAAADSVGMQPGM |
phage tail tubular protein A | W | 192 | Klebsiella Phage Kp9 | MNMQDAYFGSAAELDAVNEMLAAIGESPVTTLDEDGSADVANARRILNRINRQIQSKGWAFNINESATLTPDASTGLIPFRPAYLSILGGQYINRGGWVYDKSTGTDTFSGPITVTLITLQDYDEMPECFRQWIVTKASRQFNSRFFGAEDVENSLAQEEMEARMACNEYEMDFGQYNMLDGDAYVQGLIGR |
phage tail tubular protein A | X | 192 | Klebsiella Phage Kp9 | MNMQDAYFGSAAELDAVNEMLAAIGESPVTTLDEDGSADVANARRILNRINRQIQSKGWAFNINESATLTPDASTGLIPFRPAYLSILGGQYINRGGWVYDKSTGTDTFSGPITVTLITLQDYDEMPECFRQWIVTKASRQFNSRFFGAEDVENSLAQEEMEARMACNEYEMDFGQYNMLDGDAYVQGLIGR |
phage tail tubular protein B | Y | 791 | Klebsiella Phage Kp9 | MALVSQSIKNLKGGISQQPEILRYPEQGTLQVNGWSSETEGLQKRPPMVFIKSLGPRGYLGEDPYIHLINRDEYEQYYAVFTGNDVRVFDLSGYEYQVRGDRSYVTVNNPKDNLRMVTVADYTFIVNRTRQVRENQNRTNGGTFRDNVDAIINVRGGQYGRKLEVNINGVWVSHQLPPGDNAKEDPPKVDAQAIAEAIATLLRTAHPTWTFNVGTGFIHCIAPADTTIDILETKDGYADQLINPVTHYVQSFSKLPLNAPDGYMVKIVGDTSKTADQYYVKYDKSQKVWKETVGWNISVGLEYHTMPWTLVRAADGNFDLGYHEWKDRRAGDDDTNPQPSFVNSTITDVFFFRNRLGFISGENIVMSRTSKYFEFYPPSVANYTDDDPLDVAVSHNRVSVLKYAVSFAEELLLWSDEAQFVLSANGVLSAKTAQLDLTTQFDVSDRARPYGIGRNIYYASPRSSFTSIMRYYAVQDVSSVKNAEDMTAHVPNYIPNGVYSINGSGTENFACVLTKGAPSKVFIYKFLYMDENIRQQSWSHWDFGDGVEVMAANCINSTMYMLMRNGYNVWIAAVDFKKESTDFPFEPYRFHVDAKRSYHISETAYDIETNQTVVNVKDIYGASFAKGTVAICESDGKITEYEPTGNSWDSTPDIRISGDVSGKNIVIGFLYDFQYVFSRFLIKQEQNDGTTSTEDSGRLQLRRAWVNYQNTGAFTVSVDNGSREFNYLVNARVGSTGLRLGQKATTTGQYRFPVTGNALYQKVSLSSFNASPVSIIGCGWEGNYSRRANGI |
phage type I tail fiber | E | 777 | Klebsiella Phage Kp9 | MDQDIKTVIQYPVGTTEFDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKLLVATTGFDRVEIRRFTSASERIVDFSDGSVLRANDLNVSQLQSAHIAEEARDAALLAMPEDDAGNLDARNRKIVRLAPGEAGTDAINKNQLDTTLGEAGGILSEVKDLQKDMEDYLQNWGDDTTAIRGVLWVYNQGSAVGGETSFVITKEGPVLAVPYIEINGSRQYRGWHYEYDLGSKTITLAKPLSAGDLVVCTTAETTLPLADSLAGPTGASQIGTANGLNVQIALDNLRSGVNVLDFMTFAERAAVLNYTGTNDNSEAFRKAFATGSRQIIVPPGRYHVKDVEIPSKVKLFGTYSYKPYNVTSDASFGTDGTIIRKVAGADNMFLWNTACAAEGVMFDGRDRTSPAIQSKSGGKISVGFFKCGFYRFDRVGNRRGAYIGCSFQFCNFNQNNIGIYNTVDGNHIGCTINANKSHGVMLETGANSNTFTNCRNEWNEGDNWNFYGATSIQVINELCDRAFGYGFRISNSSVTLINVNIRRSARTAASGAASAQIYFESSTLKMIGVNSSVGGDDTGGSITEPSPDYFFRMAGTSEGRLEISDSRLTGYTVGLISGTARPSVIRVINSPGWEDTINEGVARISGGRPYIGTMPTATGPANVSPAVLGLSCGGVNTYDNDMFDIHLTIRNTNNGGHNGAILTVLLYREGGAARATIVRVDSRSNAVGEGDVNSTSADPQQVYQVSVEVTSNDASTFNLLVSTKSDNSASYRFRAKVKP |
phage type I tail fiber | F | 777 | Klebsiella Phage Kp9 | MDQDIKTVIQYPVGTTEFDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKLLVATTGFDRVEIRRFTSASERIVDFSDGSVLRANDLNVSQLQSAHIAEEARDAALLAMPEDDAGNLDARNRKIVRLAPGEAGTDAINKNQLDTTLGEAGGILSEVKDLQKDMEDYLQNWGDDTTAIRGVLWVYNQGSAVGGETSFVITKEGPVLAVPYIEINGSRQYRGWHYEYDLGSKTITLAKPLSAGDLVVCTTAETTLPLADSLAGPTGASQIGTANGLNVQIALDNLRSGVNVLDFMTFAERAAVLNYTGTNDNSEAFRKAFATGSRQIIVPPGRYHVKDVEIPSKVKLFGTYSYKPYNVTSDASFGTDGTIIRKVAGADNMFLWNTACAAEGVMFDGRDRTSPAIQSKSGGKISVGFFKCGFYRFDRVGNRRGAYIGCSFQFCNFNQNNIGIYNTVDGNHIGCTINANKSHGVMLETGANSNTFTNCRNEWNEGDNWNFYGATSIQVINELCDRAFGYGFRISNSSVTLINVNIRRSARTAASGAASAQIYFESSTLKMIGVNSSVGGDDTGGSITEPSPDYFFRMAGTSEGRLEISDSRLTGYTVGLISGTARPSVIRVINSPGWEDTINEGVARISGGRPYIGTMPTATGPANVSPAVLGLSCGGVNTYDNDMFDIHLTIRNTNNGGHNGAILTVLLYREGGAARATIVRVDSRSNAVGEGDVNSTSADPQQVYQVSVEVTSNDASTFNLLVSTKSDNSASYRFRAKVKP |
phage type I tail fiber | G | 777 | Klebsiella Phage Kp9 | MDQDIKTVIQYPVGTTEFDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKLLVATTGFDRVEIRRFTSASERIVDFSDGSVLRANDLNVSQLQSAHIAEEARDAALLAMPEDDAGNLDARNRKIVRLAPGEAGTDAINKNQLDTTLGEAGGILSEVKDLQKDMEDYLQNWGDDTTAIRGVLWVYNQGSAVGGETSFVITKEGPVLAVPYIEINGSRQYRGWHYEYDLGSKTITLAKPLSAGDLVVCTTAETTLPLADSLAGPTGASQIGTANGLNVQIALDNLRSGVNVLDFMTFAERAAVLNYTGTNDNSEAFRKAFATGSRQIIVPPGRYHVKDVEIPSKVKLFGTYSYKPYNVTSDASFGTDGTIIRKVAGADNMFLWNTACAAEGVMFDGRDRTSPAIQSKSGGKISVGFFKCGFYRFDRVGNRRGAYIGCSFQFCNFNQNNIGIYNTVDGNHIGCTINANKSHGVMLETGANSNTFTNCRNEWNEGDNWNFYGATSIQVINELCDRAFGYGFRISNSSVTLINVNIRRSARTAASGAASAQIYFESSTLKMIGVNSSVGGDDTGGSITEPSPDYFFRMAGTSEGRLEISDSRLTGYTVGLISGTARPSVIRVINSPGWEDTINEGVARISGGRPYIGTMPTATGPANVSPAVLGLSCGGVNTYDNDMFDIHLTIRNTNNGGHNGAILTVLLYREGGAARATIVRVDSRSNAVGEGDVNSTSADPQQVYQVSVEVTSNDASTFNLLVSTKSDNSASYRFRAKVKP |
Method: ELECTRON MICROSCOPY