Crystal structure of ribosomal its2 pre-rrna processing complex from cyberlindnera jadinii
PDB DOI: 10.2210/pdb7y17/pdb
Classification: RNA BINDING PROTEIN Organism(s): Cyberlindnera Jadinii
Deposited: 2022-06-07 Deposition Author(s): Chen, J. , Liu, L.
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Polynucleotide 5'-hydroxyl-kinase GRC3 | B | 610 | Cyberlindnera Jadinii | MHKSAFQALQGDIPTYEVNSSDEQDSDQDEEDVEQPSEPMHRLVSAPAASIHIEESKYISSNFSFDDDNTIYGHDYVIFGLKSNQNLIVKGQFVLEIQRGAIDINGVIYHSGVEPMKFINPSSSSIPLIQATQVLNSSLLENKESQENQHLFTPGYKSVIKLTNLDTHLESIGRVCPLFKNLFWQFDNFFAEDSLRLLDQYELAFSDYTFYPITKPDNTVSVIKHKNWMDVIKSLTELYSNDQSIKVIVIGGKNSGKSTFLRLLVQHMLSPTLQQLPINFMDLDPGQPEYSGTDCISLSKISEVQHGNHLSLTSTDSTQCHYVGFNSPKDQPTRYNLLVEQLVRSYESDGELKHESLLINTPGWIKGYGLELTRTLIERVKPTHVIYLNSGTLGVDIDIPKGTNLIPLQGSFNHSGSRYSSSQLRLLKTMAYFHKIDDFKFDFQPLLFSPPIQVSYGVSTGISALTHLKETGIGMDHLERSIEATIVGIFKVKRDHLEECELFNKGQLPLLPYKEFIKLSTEFFRLALVHSIDQEKKIMNLYIPQFRTLDLTKEAIIMVRGNTDLPIWEIASNEIVKRFKRQLPYITFEKGSSLEKKWKVRKNVQRRGQM |
Polynucleotide 5'-hydroxyl-kinase GRC3 | A | 610 | Cyberlindnera Jadinii | MHKSAFQALQGDIPTYEVNSSDEQDSDQDEEDVEQPSEPMHRLVSAPAASIHIEESKYISSNFSFDDDNTIYGHDYVIFGLKSNQNLIVKGQFVLEIQRGAIDINGVIYHSGVEPMKFINPSSSSIPLIQATQVLNSSLLENKESQENQHLFTPGYKSVIKLTNLDTHLESIGRVCPLFKNLFWQFDNFFAEDSLRLLDQYELAFSDYTFYPITKPDNTVSVIKHKNWMDVIKSLTELYSNDQSIKVIVIGGKNSGKSTFLRLLVQHMLSPTLQQLPINFMDLDPGQPEYSGTDCISLSKISEVQHGNHLSLTSTDSTQCHYVGFNSPKDQPTRYNLLVEQLVRSYESDGELKHESLLINTPGWIKGYGLELTRTLIERVKPTHVIYLNSGTLGVDIDIPKGTNLIPLQGSFNHSGSRYSSSQLRLLKTMAYFHKIDDFKFDFQPLLFSPPIQVSYGVSTGISALTHLKETGIGMDHLERSIEATIVGIFKVKRDHLEECELFNKGQLPLLPYKEFIKLSTEFFRLALVHSIDQEKKIMNLYIPQFRTLDLTKEAIIMVRGNTDLPIWEIASNEIVKRFKRQLPYITFEKGSSLEKKWKVRKNVQRRGQM |
Polynucleotide 5'-hydroxyl-kinase GRC3 | E | 610 | Cyberlindnera Jadinii | MHKSAFQALQGDIPTYEVNSSDEQDSDQDEEDVEQPSEPMHRLVSAPAASIHIEESKYISSNFSFDDDNTIYGHDYVIFGLKSNQNLIVKGQFVLEIQRGAIDINGVIYHSGVEPMKFINPSSSSIPLIQATQVLNSSLLENKESQENQHLFTPGYKSVIKLTNLDTHLESIGRVCPLFKNLFWQFDNFFAEDSLRLLDQYELAFSDYTFYPITKPDNTVSVIKHKNWMDVIKSLTELYSNDQSIKVIVIGGKNSGKSTFLRLLVQHMLSPTLQQLPINFMDLDPGQPEYSGTDCISLSKISEVQHGNHLSLTSTDSTQCHYVGFNSPKDQPTRYNLLVEQLVRSYESDGELKHESLLINTPGWIKGYGLELTRTLIERVKPTHVIYLNSGTLGVDIDIPKGTNLIPLQGSFNHSGSRYSSSQLRLLKTMAYFHKIDDFKFDFQPLLFSPPIQVSYGVSTGISALTHLKETGIGMDHLERSIEATIVGIFKVKRDHLEECELFNKGQLPLLPYKEFIKLSTEFFRLALVHSIDQEKKIMNLYIPQFRTLDLTKEAIIMVRGNTDLPIWEIASNEIVKRFKRQLPYITFEKGSSLEKKWKVRKNVQRRGQM |
LAS1 protein | C | 421 | Cyberlindnera Jadinii | MNSHPRLTPWKSSDEVVYLKGLFFPADREQISRDELYRQYEEAISLVEMYSSRTRVSHILQSTAHLFSALMMLESFEGGLDDTVRLTASMTIIRFVNGLLDPNQQSQFAIPLHLLAKKIDLPSLFVEFRHSATHDALPSLEMCKTCVDRAIDWVWDHYWDGVLSIVEPQVETDDLEESLIKELKDLFKQYRRIRRQNITKLYKFGDSTPEGKEYWTCIAGIKDHADMANFYNVMIERIVSNKLKWEHLRALFEPMMNHFIHLKGWDFPLGLIDSMLSKNYEYSKFRGIDDTERAYLNDQEFKCAQKWIRWLAIEQIDRYDDVLVSKMIDTLGKTNHELNVELLEKLQSRFSADPVIKDKIQAKLTLIQRLSTDTKTKRMNNLEDIMSDLESLKKRAKVTPTLHIKSFESHPNWTPKPFGVI |
LAS1 protein | D | 421 | Cyberlindnera Jadinii | MNSHPRLTPWKSSDEVVYLKGLFFPADREQISRDELYRQYEEAISLVEMYSSRTRVSHILQSTAHLFSALMMLESFEGGLDDTVRLTASMTIIRFVNGLLDPNQQSQFAIPLHLLAKKIDLPSLFVEFRHSATHDALPSLEMCKTCVDRAIDWVWDHYWDGVLSIVEPQVETDDLEESLIKELKDLFKQYRRIRRQNITKLYKFGDSTPEGKEYWTCIAGIKDHADMANFYNVMIERIVSNKLKWEHLRALFEPMMNHFIHLKGWDFPLGLIDSMLSKNYEYSKFRGIDDTERAYLNDQEFKCAQKWIRWLAIEQIDRYDDVLVSKMIDTLGKTNHELNVELLEKLQSRFSADPVIKDKIQAKLTLIQRLSTDTKTKRMNNLEDIMSDLESLKKRAKVTPTLHIKSFESHPNWTPKPFGVI |
LAS1 protein | F | 421 | Cyberlindnera Jadinii | MNSHPRLTPWKSSDEVVYLKGLFFPADREQISRDELYRQYEEAISLVEMYSSRTRVSHILQSTAHLFSALMMLESFEGGLDDTVRLTASMTIIRFVNGLLDPNQQSQFAIPLHLLAKKIDLPSLFVEFRHSATHDALPSLEMCKTCVDRAIDWVWDHYWDGVLSIVEPQVETDDLEESLIKELKDLFKQYRRIRRQNITKLYKFGDSTPEGKEYWTCIAGIKDHADMANFYNVMIERIVSNKLKWEHLRALFEPMMNHFIHLKGWDFPLGLIDSMLSKNYEYSKFRGIDDTERAYLNDQEFKCAQKWIRWLAIEQIDRYDDVLVSKMIDTLGKTNHELNVELLEKLQSRFSADPVIKDKIQAKLTLIQRLSTDTKTKRMNNLEDIMSDLESLKKRAKVTPTLHIKSFESHPNWTPKPFGVI |
Method: X-RAY DIFFRACTION