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FASTA Sequence PDB Format mmCIF Format
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7Y0J

Cryo-em structure of human igm-fc in complex with the j chain and the p. falciparum tm284var1

PDB DOI: 10.2210/pdb7y0j/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Plasmodium Falciparum

Deposited: 2022-06-05
Deposition Author(s): Ji, C. , Xiao, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.62 Å

Literature

Cryo-em structure of human igm-fc in complex with the j chain and the p. falciparum tm284var1

Ji, C. , Xiao, J.

Primary Citation of Related Structures: 7Y0J


Proteins
Molecule Chains Sequence Length Organism Sequence
Erythrocyte membrane protein 2 variant TM284var1 M 2373 Homo Sapiens , Plasmodium Falciparum MTSKRGNRTVINLSVTDVLEKIALQIYKEENEKKIPHESELIGTLWKAQFSDGLSGSFGDVRSGPSNSCNLHHKYYTNIKNGYPPARNPCDGRNEKRFSNEGEAECGSDKIRVIGKGDGTACVPFRRQNMCDKNLEYLINKNTKTTHDLLGNVLVTAKYEGASIVAKHPHKDTSEVCTALARSFADIGDIVRGRDMFLPNKDDKVQKGLREVFKKIHDNLSSSVKPHYKDDGSGNYVKLREDWWAINRKEVWNALTCEAPQSVHYFIKTSHGTRGFTSQGKCGRNETNVPTNLDYVPQYLRWFDEWAEEFCRLRNHKLQNVKKECRGENIGDKYCSGDGEDCEKIVRQDYNIRSDFLCPSCKKECTNYKKWIDTKQGEFNKQKKKYEKEIKKVESNSDTTYDKKVYKILKEMYPLNSEFVATLKEAPYCNNNNVDGTIDFNKPDDTFSRSDYCKSCPVFGVICTRGECTEVKEDTCSKMNVKVPKKITNKEDPINIGILVSDDRVSVIPNELENVCKDTGLFKGIRKDQRSCNYLCNLDVCDLSHNKNNTHIDKRISIRVLFKRWLEYFFKDYSKLKKKLNSCTNNGEKSICINKCKKKCECVGKWVEEKRTEWEKVRKRYFSQYNVDDSQKSYTVKSIVNGNVDRSDINNSLDESEDIETLKESDTCYNSDSAKKQKCEKNDVITILIDRLKKKIDDCEKQHDNRTNQICCDELPESKEDDEDEEEEGKKKKNAKQLEVTNEKKEQEDKNLFQVCQKMKKVITDNNGERIRNQRCNEKTDRKWDCSTNEIPTNHTGACMPPRRISLCIRPLRYLVDNGGKKSIDDYKNAFTECASIETYLLWQKYKRTNGAEDKLKDGEIPNDFLRIMYYTYGDYRDIFLGTDISKNPNIKNISNKVKNILKFKKSMDESGKNQDENAKVQSSWDEHKRDIWKGMLCGLTYDIQNEKKDILKILNNKYNYPCDLEVFASKPQFFRWFIEWAEDYCRKYNDEYEKLQTACSTVDCSKDPTDSEKQKCKNACDNFKTFVEGWKKQYDSQKNKFNKIKIEANIKNTYKGIENKEAYVFLSEECKGKCDCIKYKTDYDTNANDPKGFDTPPKEQKDNCECVLRKKSACENNEVPKGRTQSQMTCADLKNESPSKGNNNTGNNHKETITFSCNKSNLIGLGAQWKKITDDGLYASPRTRQLCLKHVIDIGRNNTKKNNITEEEFINVLQKDAYAEGKLLYMYYNSNGKISIFQNGEKLKLDDIEKHTHEAMKRSYADYGDLIKGTTKYTQYNDYNKISDIINVVTKKKNSASINDIYEREEFWEKYRADVWNAMLCGYKDVSNKTFDGNDDMCNLPNTDKEEEFLRWFKEWNENFCITQIKRAEKLKNECNNFNCSSIKSKKDDIKSKCVKACINYKKFVKESKTQYEDQKRTYNERHNKTNKDIPTFLKDNCIHKNCDCISIKFNHKDNWEKSFFESLDSSDIKNKCECLKLEEESNTTERYISKEDPQYHPEYKGDGKVNYKYEKGKPKALPSIYPLNCAEKVADELRMYAENSLDTNTKLKAKISKSIDTNEQNATNDEIDCNIYNNISNGQKNTCEHNGNTFHDKDEWDCNKGTNKLYENDICLPPRRKHMCTKQLENISTASITTTDDLLKEVLITAVNEGKRLKQQWEKTENEAQKKKHFLCDAMKYSFADLADIIRGTDIWKGNREQQKIQERLVKIFRNIYDNLEKDEYEKYKYGTKYQNLRSAWWDAHRKKIWNAMTCSAPGDFLFVKRGKGDGSDIEFLTFSEHKKCGHDKEPPVYDYVPQILRWITEWSEHFCELQEKNYYLLKEKCADYIQKDSKPIDDSHNIKCNTCKTKCEEYSKFIKKWNSQYINLEKKFKELYDEANNTKSYEELYRIGKPSHRNHYEDENLIQFLQNVKSECNEPNTVDKYLMYTSDCRRVKFSNTIDTNVNKPTADVTHNTINGPSSNLPVVTETNIKNELREYAFLETPEGYGNACKCKGPEPLDRCPENDNISNYCNDFVSVPECTAKIYKDEIDHWNNANVKFKTSINNGVLVPPRRSHICLKNMITKNYDKKKNGMEKFKTDLLQVAYNEGYFLCQKYDKQPRDVLEAMKYTFADIADIVKGRDMINKDISAKLRKLLDIKVEPKAPRKWWKYNKAHVWHAMLCGYRKGGGTITNDECNVPDEEYTYQFLRWFQEWIKKFCTGQQKLYDDVQTKCSSANCNRDDGTISLPECESSCVQYKNYITRKRQEYRSLNHQYNMNFKEQKAQGMKATQYIDDKCNSKCDCLIKYIDREKEWTNIYDSLENNDLKNKCDCKQIKPKRHPKEVNPEEEPANSEPDYIVPLVPQKPSTPEVPPPPPPPLPTPSDEPFHHHHHH
Immunoglobulin heavy constant mu A 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu B 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu C 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu D 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu E 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu F 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu G 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu H 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu K 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu L 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin J chain J 136 Homo Sapiens , Plasmodium Falciparum EDERIVLVDNKCKCARITSRIIRSSEDPNEDIVERNIRIIVPLNNRENISDPTSPLRTRFVYHLSDLCKKCDPTEVELDNQIVTATQSNICDEDSATETCYTYDRNKCYTAVVPLVYGGETKMVETALTPDACYPD
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-06-05
Deposition Author(s): Ji, C. , Xiao, J.