PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7Y0J

Cryo-em structure of human igm-fc in complex with the j chain and the p. falciparum tm284var1

PDB DOI: 10.2210/pdb7y0j/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Plasmodium Falciparum

Deposited: 2022-06-05
Deposition Author(s): Ji, C. , Xiao, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.62 Å

7y0j
Literature

Cryo-em structure of human igm-fc in complex with the j chain and the p. falciparum tm284var1

Ji, C. , Xiao, J.

Primary Citation of Related Structures: 7Y0J


Proteins
Molecule Chains Sequence Length Organism Sequence
Erythrocyte membrane protein 2 variant TM284var1 M 2373 Homo Sapiens , Plasmodium Falciparum MTSKRGNRTVINLSVTDVLEKIALQIYKEENEKKIPHESELIGTLWKAQFSDGLSGSFGDVRSGPSNSCNLHHKYYTNIKNGYPPARNPCDGRNEKRFSNEGEAECGSDKIRVIGKGDGTACVPFRRQNMCDKNLEYLINKNTKTTHDLLGNVLVTAKYEGASIVAKHPHKDTSEVCTALARSFADIGDIVRGRDMFLPNKDDKVQKGLREVFKKIHDNLSSSVKPHYKDDGSGNYVKLREDWWAINRKEVWNALTCEAPQSVHYFIKTSHGTRGFTSQGKCGRNETNVPTNLDYVPQYLRWFDEWAEEFCRLRNHKLQNVKKECRGENIGDKYCSGDGEDCEKIVRQDYNIRSDFLCPSCKKECTNYKKWIDTKQGEFNKQKKKYEKEIKKVESNSDTTYDKKVYKILKEMYPLNSEFVATLKEAPYCNNNNVDGTIDFNKPDDTFSRSDYCKSCPVFGVICTRGECTEVKEDTCSKMNVKVPKKITNKEDPINIGILVSDDRVSVIPNELENVCKDTGLFKGIRKDQRSCNYLCNLDVCDLSHNKNNTHIDKRISIRVLFKRWLEYFFKDYSKLKKKLNSCTNNGEKSICINKCKKKCECVGKWVEEKRTEWEKVRKRYFSQYNVDDSQKSYTVKSIVNGNVDRSDINNSLDESEDIETLKESDTCYNSDSAKKQKCEKNDVITILIDRLKKKIDDCEKQHDNRTNQICCDELPESKEDDEDEEEEGKKKKNAKQLEVTNEKKEQEDKNLFQVCQKMKKVITDNNGERIRNQRCNEKTDRKWDCSTNEIPTNHTGACMPPRRISLCIRPLRYLVDNGGKKSIDDYKNAFTECASIETYLLWQKYKRTNGAEDKLKDGEIPNDFLRIMYYTYGDYRDIFLGTDISKNPNIKNISNKVKNILKFKKSMDESGKNQDENAKVQSSWDEHKRDIWKGMLCGLTYDIQNEKKDILKILNNKYNYPCDLEVFASKPQFFRWFIEWAEDYCRKYNDEYEKLQTACSTVDCSKDPTDSEKQKCKNACDNFKTFVEGWKKQYDSQKNKFNKIKIEANIKNTYKGIENKEAYVFLSEECKGKCDCIKYKTDYDTNANDPKGFDTPPKEQKDNCECVLRKKSACENNEVPKGRTQSQMTCADLKNESPSKGNNNTGNNHKETITFSCNKSNLIGLGAQWKKITDDGLYASPRTRQLCLKHVIDIGRNNTKKNNITEEEFINVLQKDAYAEGKLLYMYYNSNGKISIFQNGEKLKLDDIEKHTHEAMKRSYADYGDLIKGTTKYTQYNDYNKISDIINVVTKKKNSASINDIYEREEFWEKYRADVWNAMLCGYKDVSNKTFDGNDDMCNLPNTDKEEEFLRWFKEWNENFCITQIKRAEKLKNECNNFNCSSIKSKKDDIKSKCVKACINYKKFVKESKTQYEDQKRTYNERHNKTNKDIPTFLKDNCIHKNCDCISIKFNHKDNWEKSFFESLDSSDIKNKCECLKLEEESNTTERYISKEDPQYHPEYKGDGKVNYKYEKGKPKALPSIYPLNCAEKVADELRMYAENSLDTNTKLKAKISKSIDTNEQNATNDEIDCNIYNNISNGQKNTCEHNGNTFHDKDEWDCNKGTNKLYENDICLPPRRKHMCTKQLENISTASITTTDDLLKEVLITAVNEGKRLKQQWEKTENEAQKKKHFLCDAMKYSFADLADIIRGTDIWKGNREQQKIQERLVKIFRNIYDNLEKDEYEKYKYGTKYQNLRSAWWDAHRKKIWNAMTCSAPGDFLFVKRGKGDGSDIEFLTFSEHKKCGHDKEPPVYDYVPQILRWITEWSEHFCELQEKNYYLLKEKCADYIQKDSKPIDDSHNIKCNTCKTKCEEYSKFIKKWNSQYINLEKKFKELYDEANNTKSYEELYRIGKPSHRNHYEDENLIQFLQNVKSECNEPNTVDKYLMYTSDCRRVKFSNTIDTNVNKPTADVTHNTINGPSSNLPVVTETNIKNELREYAFLETPEGYGNACKCKGPEPLDRCPENDNISNYCNDFVSVPECTAKIYKDEIDHWNNANVKFKTSINNGVLVPPRRSHICLKNMITKNYDKKKNGMEKFKTDLLQVAYNEGYFLCQKYDKQPRDVLEAMKYTFADIADIVKGRDMINKDISAKLRKLLDIKVEPKAPRKWWKYNKAHVWHAMLCGYRKGGGTITNDECNVPDEEYTYQFLRWFQEWIKKFCTGQQKLYDDVQTKCSSANCNRDDGTISLPECESSCVQYKNYITRKRQEYRSLNHQYNMNFKEQKAQGMKATQYIDDKCNSKCDCLIKYIDREKEWTNIYDSLENNDLKNKCDCKQIKPKRHPKEVNPEEEPANSEPDYIVPLVPQKPSTPEVPPPPPPPLPTPSDEPFHHHHHH
Immunoglobulin heavy constant mu A 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu B 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu C 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu D 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu E 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu F 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu G 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu H 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu K 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin heavy constant mu L 383 Homo Sapiens , Plasmodium Falciparum ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
Immunoglobulin J chain J 136 Homo Sapiens , Plasmodium Falciparum EDERIVLVDNKCKCARITSRIIRSSEDPNEDIVERNIRIIVPLNNRENISDPTSPLRTRFVYHLSDLCKKCDPTEVELDNQIVTATQSNICDEDSATETCYTYDRNKCYTAVVPLVYGGETKMVETALTPDACYPD
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-06-05
Deposition Author(s): Ji, C. , Xiao, J.