7XZI
Cryo-em structure of toc-tic supercomplex from chlamydomonas reinhardtii
PDB DOI: 10.2210/pdb7xzi/pdb
Classification: TRANSLOCASE Organism(s): Chlamydomonas Reinhardtii
Deposited: 2022-06-02 Deposition Author(s): Li, A.J. , Liu, H. , Liu, Z.F.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.77 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Ctap3 | 3 | 477 | Chlamydomonas Reinhardtii | MADGPSPIRIVLWNDGGESLAAGVEDEEQQQVLHSFADLVGSAIDAVLELPQFRHVEAVTAEAEEDEPGLSIGFDAGSGDGEVDIDNLKGRLDIAGLLLGSAQLPEELAEVAAVEVTDEEEGTTELQFTDEGLVQQLQAVVKRAKLEKRYNDWVAGVAESLGPALDAAAGGVEVTEMPVDPYDVLQAVVAQLIRVAGVSPPAPSLFSRTGALVGGVLGAPRSAVRQVTKRLGRAQRLWWRLEDVVVDGSKLALRLAVKAARPVLVGFVLHRVLKTLDRSRQLEYRLARMGPEEAREAYYEAVLGKDWKQQLQADWDKALEDVDAGLVTDEINHEKRLMTAAQLRRLEVEEWDKQRMKNFYLASFGGLRWFDQMEQALHNPLFIESRGWTDPVQNWVGQNRTYMDDLPAGQYMAGVGNAAIRIKEAELKRKLTDVERAHVLARGGAVAGGLLPQQPTDPATLAVAVGGAFVPSVAGKR |
| Tic100 | E | 955 | Chlamydomonas Reinhardtii | MASKKGTDAPAALTDPLKEDPTVIRDEAQFPEPSLYFKVFESEAGEPEAKIRADVNKLYDRWIEKYGRRWPEDGINTEDMVWLAEEANKRKRAKPRPRGTVAAEKTEYEDEFMPDPTVGAPVSAADAAKAARRAKKDRKKKKAAGGAEQPAGPRTNYEKTVAGGKWVTDEFESADYEAGNLEKLWDMYLWDREGKPTMMPDTPAAQQEGEESEDFDDFYTAYRPRDVDSEEAREAVWATDEFESDEDNTESEWAPEYVGAGLGLVAEDPLNPQYSLRHSNHPLAPFPGEPLKWASYVYPDFTTFEGLSKQSIPHGMGVMTFGTGTGAGFAMSQTRYGDKYEGEFQAGYAHGLGQFTSEASGEVYIGEFFAGQRHGCGMTLDMKPYFYLLERGVDPVEAYRRTAGAIMKNVEVRTWYRGNKLGDAKEDEVVEINVLKDELDDPFEIALRNSLHDAKLRKWKAMSPQDKAMDRIVSIIERVQRRNPGRFGAYYREDEKGRVRPVLDSDGADTDFDSVDMIQGVDTDGDLGPGWEGATDSEENPMDPRIRELMAAEGMDDKLEDEGFKDTVLGSAIINPYTGLDMKTYLDGKERHQAELVSVYKASREGRKYLNKVRKDKGGAAKDDESSYVEDDAASGHPGALLSREAEDDRLARLYEQAGVSKEDERRVEGLAARWRRLLAADEEEVLGGAVGAFRRPGNPLAANDSDTGFETESDMMEMCDIPEILGTVQEARQIVERARMWRFKPYGEVGLRMAQDANGSPVSLMQEPLHYPHGTKFMAPGPLGLCHAVPDDPSLRQEMAKVAHNYAAIYRMYNFDWDPEPGTVQYKIDQRIRRAQELRNNAMARYLAAADEVLRDGAAPAGEGDQALLLASTSTGAPEAFDGQGNASGSGSSSALSSRGGSMFASMTLSRPAPMAGVVSLGRAARVVLGAFADAAKSVPMARPRLARPSGRRQ |
| Tic56 | F | 244 | Chlamydomonas Reinhardtii | MSEPGAGPSDGQVVTRKIRLHKVMRPLDESSPSSQEQHMDRRLAEILPAIADLPVPGPSGAGGSPADARAVEMRRLRGTQQELAQMEAMELATLFDMSKPHPLDNAAPATPWKGELRPVPRKIVLSPYQYEMINYQRMLMRKNIWYYRDRMNVPRGPCPLHVVKEAWVSGIVDENTLFWGHGLYDWLPAKNIKLLLPMVRTPEVRFATWIKRTFSLKPSLNRIREQRKEHRDPQEASLQVELMR |
| Toc34 | G | 397 | Chlamydomonas Reinhardtii | MAQPPRPAEEYDDDVQEDEDELKEGELDDDESHEAASEGGEAAAGDEEAEDDEQDEEDGDEDSQPWAGLNRLPERDDMLDILNELRAEGRKQLTVLLLGKSSVGKSSLINSLLGEAVVRVQAFKLQADTDITTTVVRQVAVGNSEVDGFRLKLIDTCGLEDPEAGDTVNLGALSKIAEDVRGVGIDVVLYCDRLDLYRVDPLDKAIIDAISSTFGRGIWRRTVVALTHANLVQTPPGTDYDSFVNGRVRLIRGAVRGPLFFRPSLPVALVENSETCPVSSESGFRVLPDGEPWLVALVSQLVDMAAARRRPYKYHPRLSSKPSHRFRWLLPVAIAAEVLFYRRFLHPRLDDNQRRVEREEERVWALRGQQRRALGLHRPHRPDKDAAWRLEQMYDDD |
| Simp2 | U | 124 | Chlamydomonas Reinhardtii | MSSDVQAKLSGLLGDIGVKCTLAFAGTVAAGAAIVVPSGKQVEAASLDIYGRPPSQLLPNERRAAEFAAGHRRWKGFVDNSIYSWTRTLPGHDNPIVNPYKGPRRPQRPQQKLEEEVEAAAKQE |
| Unknown peptide | X | 21 | Chlamydomonas Reinhardtii | AAAAAFAAFAGFAFAAFAAAG |
| Ctap4 | 4 | 363 | Chlamydomonas Reinhardtii | MGASQESELDFVPRLSFLPIEWRSIGSAFGLKDKSGAAANGRATFTVRQGVDAAELTSTGRVIDGQADVGASLKLNTLAIGVSASNITFHSGLDDPTAAAAQRSSLIPSLKLTAAKQFKRDNYIAVSYDLKHQKPELSACWTGEAGADRATLLVNVDPVMRSVKLAAAVRTPGPEWRKVLYNDETDLLEYPADDGARHTLYVQHEVRGRDLLHATRLGCRLDLGRLVNYVVDFVDYRIEENIPSFVWNVPLLPQLYSLLVPADNDEQVRHRITGWELDVSHDFARSGLLPVVAISKTSKKLLGGGTLTASYDAAAREAGVSLSRKGVSVGARVARAEGAAGGLSAGWGRPSIHVAVEPLGLLQ |
| Ctap5 | 5 | 383 | Chlamydomonas Reinhardtii | MQLGQLRQPLRACQDQRLTRGVPLARRQLVVVSNWNPLGGKGGGNAEQPGGEEPIQDELLKLLRGGWVLLSNLALFLVFSSFLHRSLNWFVQTELLVAVGAPQQAGERVVGKFFEAIEWVERNILGWKLPGDEEAEDATSKVYEVLQNYTPAEAAYSFAQLKYKDLTHKERELFHKAYALRHFERRDGRPGDVDAAELQAVKDRLDPLEADRRAYAAAKAAGRLDEYWAAPGREATYQRIVGAPRIAARQCEMASMLKGLQAVLPAMELLAQLQVAQFVYAASKASKSRQQDDFKLQLQTFYGNVLDEQCQLRCMLLNVQLPMALVTVFVPQYCFCLLDRVVLPRRECGSASTLGSLLRACGRPGSACHAGGCSAQRRDPLTI |
| Toc75 | 7 | 798 | Chlamydomonas Reinhardtii | MQGLKATPGLRASSGRPTLRTARTALVVRAHASQPSSSNHAEQQECSSSGSGVSVNQPSALGRLGKFGLSSALSAFVLVPNFGGFGGNGGNRGGGGGGGGGGGSGGQGQPDGGLPLPLYELAEESSDEKEKQQKDDKRNWKNLVTDSEDLEEKPGERSGTNRCVEIVIEGWPDVGNLPTADELKDLLTVQEGHIFEKQDLLDDRRKLEIQYEDYIAEVEIRTEYVDGKSNHQRVVYKFTPHQFRGINAIDIKGAALMPASEVERICNECLPKQPYMVDIAVMDKVRNRIEQWYQSRGLPFCYVGFFDGMDDGILRANVTEAKIDNVSVRFVRPKLTGDSELEYSVYDEGKVVKADKIIEASGFQRGHHYHVEDGYDAMNSIFACGLLEDINIEPEQDPSDVNKINVKIRCEEVQPKSMELDLDWSFQLKNGIPSINRQSLIPGGSVEVSHENLFGNSESATLSLSASDWRNPSADLGFSVAYSEPFYKPHTTRNAQLFNTRKTSTIFTPGGESEVPPVFVDRFGLKGWTSQITGQDNKVEHALMLQLVSTLDENGQVVAKGTKVQRGYYADNGPPTTNSGNGRDLSLSYQGFFALDNVRFINGNQLGERMLFQVDQGLNPSISLPGGRKLGLSGGIYNRATASYTKFLEAPFLPKLTTEQLWKERKAPNTVVLHAKAGNALGDVAAYDYFSLGGPYSVRGYSHGEIGAARRFLELATEVRVPLKNYGLPGTAYGFVEYATDLGSGRELNGNPTEYYRKPGRGMSYGLGLKALGACRFEYARDCNAGTGTFLVNFGERF |
| Toc90 | 9 | 967 | Chlamydomonas Reinhardtii | MGGGLPPKRSEVAESQPASSASSSAAAPAPAAETAGPKLPPRPAGLGLGGAGLLPSRGAAAAPSAGSATGTPAAAASSSLQQQQQQPAPPATQPAAHAAPAAPAGLGGAGLKPMLPPRPAAAAGAGAAGAAAAKPTPAPAPAAAPVPAAAPPPRPAMPNPAAGMSLPPRPVVAAAPPVLAAAGSDAVVDPSEDRRVQRVQRIAHDTRVRLIRAASRLGLAPRTDQVAQFLQAIERSERMVGAQHYKGSRRVDLLAAAEREARLAEEREGAAAEAVAGLRVKILVLGMTGTGKTELINSLLNRPAGSRTNAFREATRRVRVVRGDHNGIPLTFIDTPGLHASASRTADNRAILRAVRAAYRWHKPDYVFYVDRLDATRPGFGEMGLLGLITESLGAGVWRNTMAVLTHAHAARTAFGGQYDVNSRQRRNIVSQLLRQAAGDQQSRNPVFLADCHPACPTNSLGQPVILEGPTAVPWKQQLLVQLVGYKSYNVATSAFKDLAKAKAGKAAAGAAGGARGPQDIFKQMMRSRLPPMTFFVEQMSEGVLKPEGWATMETVAGLGEEVTEDEGAESFNHVYYRQMYELAVAGDPWAQREYAAMLRAYDKGCESYRASYEEADVDANVEYGVESYVVDPIDFGPSFDPEDMYSHRHAYAEAADAGVTVIPSQDYYGPEHDDPLNGIVFQYEAQPFSRHGWGGVPFDLTVCCEKDKTSLCLQGETHVSLVHSVPPFGPRHITQVTGSWEVLRPNIKDVMYQLEVDTFKDGLLGKSDHAGCGLMLARLGEGGDPRKGPTAVGVRLQDTLRVGPFKLEACASKVAVQGPTGGKEEGWGARAFVGYDWLPGLGMAFDFIQERTPEEGGKRLRGYGANFTYDWEALGAAFGMEVDYVAASESVFVSVNAFSGNDYRLGWLLLLPAVNYFKETVSSLWARLRGAGGGEGEEGEELEEEGEGEEGDDEEAMMMMAQEGDL |
| Tic214 | A | 1995 | Chlamydomonas Reinhardtii | MITFTFMSLVTSVKDYVEITHKLIEIEPLKNYTEFGAVFTYFIFSIGEFFKNFFSFSFLNNIWSIPIIIPDIASAMISEVSVLDGYFHNAFTFLETSVNTTTNPSLVIFEKFVIGIINSLFLILPTSTSHLITLRRFVMQGLEAGYMAGLGTLAGNFLWLASIILGWRFFVIPWLSLDIFRYLLGFVLLVKYIWDSSKERRMALEDLSKWKIFLLNFLLALTEQSCIYPFISNLSFGPDASILEGFPVDNYPQFLLIHGAYLLGILFGSFSLLQFTCWFWENPAFSIYLWITTKSSLKISTSSYYKILNFTFLYATMLCAIASIPYYGLDYTITNPIGLVPQDRILNQKKSQSDPDKLITETAFLNLNPTDKNSRIRDGVHARRERWKQRLIKYQAFDASTYDQGVYDFLTIEDLNYGFDRFWLRRKMRNHQIRFRLFPGPWMRSLKKQLNNPANPSLETSTKAASGPRVEFFRILFEQFYHPNFHDRAAMQTNPAEARNKFISTSPLASTESKKALNSTFSLGNINNSSTGIEGLVLTNTQATLLPTDLQTKRTIKPGLIYTNSALRKFVRNVNTRLNLKLLNSKETNLTTKYKSQFIYSKRWKSIFSKIQPLQNGTTRKSYQLFRNVAKQILVTPDAKSLKLITINQKLSLKERKLLELRTQYNNNSTLTTTAPLTLVRPLNVYLQKEEAFKRKLRYYGTMPMRKLTVGNQAPYFKALMKRGFYYYKPTLRWRKTLYVASLRRGFRKKSRKQRILVMPSNQQNFNNTLDNTKTNINQNNLANPLGGNEVPMYGADGENSLITKPTHSYTVLGKRASRYRHQIYKDVLQHWYYTPFNRLLMKFDVDAFINRQPKSHFLTKNEERALHIRRFLLSEHYDTLRWYTYMQHYKTMKTNIGGTKSFANRAYNQQFQGTFKKIRHLFAITPKQGDFYTLKFDQPLYNDNKLKDNLYFHEELLTDYYNGTNLQTNQTSNISVNSTTTFIDNSLRTTQLPVPSSSFDIVNQSSTLIGLTTMQNALRKNVVESTLTSLNSDGEAATSQPKLNFVYSELFVKLIKECKKRIHDQTFLKNYITHRIEKREQLNQEQTKELNKRLEKLKVWLNSDKGSISKLQNTPVQDPNISSPDKVLTTAMQKAVNESISLSGIMPSDKIKTTYGNLTNAYTIKTENAILTKLNVINQLTNNETTTQKNTLIKSIGVNKIQTVLQTIITNFKSSLYNQTQLLRVKTDKDLQWWRTKQRVITKRKSARKRDRFKKQIAVVNKKLAALSKKVETEKSNLYQTLYGNYEISDYLLRNVPTGSSAVIDSTVLRKKQDNQAYLPKETNNVQFNSFVDSNNNVWQTFFAKKLRKKISSKGRRYRSLSLARYLTATRKPRLVGLDNLTKIDNITTLQGAFITKEEKQDSLNLTIQRKQELTNSLKKSQIKKRSRHSWKKRSRHQFSRNHYKYRKRHTHGNGKLRVMNKKLKKFKATNELRQWWWNSFLPRYLSNLQVNNSTLTNKNVSFKPLSNTNSVPSTNMASPTTSRNLLDNLNSSNQISTSASMNQNIVTESVKVETNQVYLPEGEKSFDITSMTTTLPFYAGWDESLKKFVVTNRLLSRRDAGLSVNNNPQEINFTNPPIQGLNEGSFLYWQTEMPFNSYNIDQFITTNQSFYAPLGWRRFEFRHSILKTWVNNTKAGNNNIKKKTLIISLKNLQPLKSSQQKQNQIKTKKLVARRIKKRYKLLKQMPNQLMYSPTGPLLTEVLPSHYISVFDQQYRLPRNRYLKRNPLKTLKKTTLLALMDSSKQTNGVNKEFTLRKRVKPRRKYHRKRFIKKDGLIFPRRTKFNTNTTLTGNALITNNVNSIEEDDLRWRPSSRTKQKRKDNTRSSAASKTKSNKRVKTNPLRLRQLRRREFQQVLKPLQRYIPQNGGFTWPGDYLRLEIVEMPKLKSINIKKTSLKQKINVQPVGIMPRKYLIEKHNIKVLKKKLSQAYSTQQLTKVVQEYKNLIQNSPPAI |
| Protein TIC 20 | B | 259 | Chlamydomonas Reinhardtii | MSALLSQASGFSGLALGSSASSKRLCKPLCRRPAVCVQAAHRPASAVSSGVPSTGFGPVSPLQRRPTLPTRKLVVASSQSGGRAEDAEKQDWKFGRNEGPMTWPWKLMCAILYMLPWVDVTEKTVYFVERFPAFVWTEYFSEPFEHWYNIHEYAPLFIFFATYLGIVRNKKIPHVARYHVMMGVMLDIVAMILIVTEENLPTGVLWTPWSDLFYALMFWFIFLLVIYCLFFCFLGWYCEIPLISEGVYLQIEQAEQLGQ |
| Tic15 | C | 127 | Chlamydomonas Reinhardtii | MDEEPPFNLALNVYKGPASIPHASAEVFGAFFLATNTALLAHMFPGKLFGSELHVRKWDPDYLASCCNEQGMRREALSGKKPNLWLLGGGPRLVNDSWERMWWNNLHWKRWKVPRTGPAFPQDMYWQ |
| Simp3 | D | 187 | Chlamydomonas Reinhardtii | MATCAAVSLATAVFQVAAKYVNKARDAVASALPSPSNIDGVQQDWRQQVKELKKHTRVLGFVLPLAKAFAAESLTSVYARTFERAAFGFAKMYLFCLFMRVLLSWFPSIDWNSQPWAFLRLITEPYLQIYRGILPPLFGQLDFTPLFGFLILQDVVELMSPVYTLGHAKDTSMFWTTTDIMCYFDGH |
Experimental Data
Method: ELECTRON MICROSCOPY