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FASTA Sequence PDB Format mmCIF Format
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7XPG

Cryo-em structure of the t=3 lake sinai virus 1 (delta-n48) virus-like capsid at ph 6.5

PDB DOI: 10.2210/pdb7xpg/pdb

Classification: VIRUS LIKE PARTICLE
Organism(s): Escherichia Coli , Lake Sinai Virus 1

Deposited: 2022-05-04
Deposition Author(s): Chen, C.J. , Chen, N.C. , Chuankhayan, P. , Guan, H.H. , Lin, C.C. , Wang, C.H. , Yoshimura, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.51 Å

7xpg
Literature

Cryo-em structure of the t=3 lake sinai virus 1 (delta-n48) virus-like capsid at ph 6.5

Chen, C.J. , Chen, N.C. , Chuankhayan, P. , Guan, H.H. , Lin, C.C. , Wang, C.H. , Yoshimura, M.

Primary Citation of Related Structures: 7XPG


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid protein alpha A 565 Escherichia Coli , Lake Sinai Virus 1 MNSICSLYCLFRRVMPYSSEILSSTVYRPPFLATSGLFFTRDHYKFIIMNQQQINPAQRSLRPRAQSAPSRSARRRRNRRRRNPSTPAGTVALQPSRITRRVVSNLARRPLTITTAGLAWLRQYLNPMGPSTSSVSGFPDGSAVTTCIADYTNTFNISFPPREAIYCTGSNSDEKPVMLDAATYAKIDAWTKSDITLCILALPMLRNVVMIRLYASTPTAFTLSEGVPNFVQRFPNWSAFTTEGKVLNNGDSPGYIQSFVYLPNVDKHLSAARGFRLLSRGLTGIYTAPSLETQGFVTACQYLAEGALQTQTVGNDFVQSVEVNADKTVKNVNGKRLHYSGPPKFVFPLEGDNCAPSSLVETYHQAYQARAVDGFYMPILSSSRDNPFISPKPQPIAVFNRWYYRGCLDPVPASKVADGPSQYYYDLNVADDVAPLYNTGVVWMEGISSKFSLKLKTRTVIQYIPTSGSVLANFTRHEPTYDQVALDAADRIRNMMPHAYPAAYNDWGWLGDLLDSTLSMLPGIGTAYRFAKPLIKPAWNWLGGKVSDFFGNPVSRDGDIYFDAK
Capsid protein alpha B 565 Escherichia Coli , Lake Sinai Virus 1 MNSICSLYCLFRRVMPYSSEILSSTVYRPPFLATSGLFFTRDHYKFIIMNQQQINPAQRSLRPRAQSAPSRSARRRRNRRRRNPSTPAGTVALQPSRITRRVVSNLARRPLTITTAGLAWLRQYLNPMGPSTSSVSGFPDGSAVTTCIADYTNTFNISFPPREAIYCTGSNSDEKPVMLDAATYAKIDAWTKSDITLCILALPMLRNVVMIRLYASTPTAFTLSEGVPNFVQRFPNWSAFTTEGKVLNNGDSPGYIQSFVYLPNVDKHLSAARGFRLLSRGLTGIYTAPSLETQGFVTACQYLAEGALQTQTVGNDFVQSVEVNADKTVKNVNGKRLHYSGPPKFVFPLEGDNCAPSSLVETYHQAYQARAVDGFYMPILSSSRDNPFISPKPQPIAVFNRWYYRGCLDPVPASKVADGPSQYYYDLNVADDVAPLYNTGVVWMEGISSKFSLKLKTRTVIQYIPTSGSVLANFTRHEPTYDQVALDAADRIRNMMPHAYPAAYNDWGWLGDLLDSTLSMLPGIGTAYRFAKPLIKPAWNWLGGKVSDFFGNPVSRDGDIYFDAK
Capsid protein alpha C 565 Escherichia Coli , Lake Sinai Virus 1 MNSICSLYCLFRRVMPYSSEILSSTVYRPPFLATSGLFFTRDHYKFIIMNQQQINPAQRSLRPRAQSAPSRSARRRRNRRRRNPSTPAGTVALQPSRITRRVVSNLARRPLTITTAGLAWLRQYLNPMGPSTSSVSGFPDGSAVTTCIADYTNTFNISFPPREAIYCTGSNSDEKPVMLDAATYAKIDAWTKSDITLCILALPMLRNVVMIRLYASTPTAFTLSEGVPNFVQRFPNWSAFTTEGKVLNNGDSPGYIQSFVYLPNVDKHLSAARGFRLLSRGLTGIYTAPSLETQGFVTACQYLAEGALQTQTVGNDFVQSVEVNADKTVKNVNGKRLHYSGPPKFVFPLEGDNCAPSSLVETYHQAYQARAVDGFYMPILSSSRDNPFISPKPQPIAVFNRWYYRGCLDPVPASKVADGPSQYYYDLNVADDVAPLYNTGVVWMEGISSKFSLKLKTRTVIQYIPTSGSVLANFTRHEPTYDQVALDAADRIRNMMPHAYPAAYNDWGWLGDLLDSTLSMLPGIGTAYRFAKPLIKPAWNWLGGKVSDFFGNPVSRDGDIYFDAK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*UP*G)-3') d 2 NA UG
RNA (5'-R(P*UP*G)-3') e 2 NA UG
RNA (5'-R(P*UP*G)-3') f 2 NA UG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-05-04
Deposition Author(s): Chen, C.J. , Chen, N.C. , Chuankhayan, P. , Guan, H.H. , Lin, C.C. , Wang, C.H. , Yoshimura, M.