PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7XPE

Cryo-em structure of the t=4 lake sinai virus 2 virus-like capsid at ph 8.5

PDB DOI: 10.2210/pdb7xpe/pdb

Classification: VIRUS LIKE PARTICLE
Organism(s): Lake Sinai Virus 2

Deposited: 2022-05-04
Deposition Author(s): Chen, C.J. , Chen, N.C. , Chuankhayan, P. , Guan, H.H. , Lin, C.C. , Wang, C.H. , Yoshimura, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.32 Å

7xpe
Literature

Cryo-em structure of the t=4 lake sinai virus 2 virus-like capsid at ph 8.5

Chen, C.J. , Chen, N.C. , Chuankhayan, P. , Guan, H.H. , Lin, C.C. , Wang, C.H. , Yoshimura, M.

Primary Citation of Related Structures: 7XPE


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid protein alpha A 520 Lake Sinai Virus 2 MNPPTTTTTTTRTIRAPKVQLTPNSATRRRRNRRRRRPAAAIAGPLSIQPSSINRRMVSRVTRRSAVVTAAGLAWLRQYLNPMGPDTTSVTGYPDGSAVTTCIADYSNTFNVSFPPREALYCTGSSSSEKPTLVDADNYAKIDKWSNYDITLCVLALPMLRNVVMLRLYPHTPTAFALTEQTPNFPQRFPNWSVYSADGTRFNNGDEPGYLQSYVYLPNVDKHLSAARGYRLLSRGITGIFSAPALETQGFVTACQYLAEGSIQSQSIKSDAVRSVTVNSDGTVKNVESSSQTVSSMPRYVFPLDGDNCAPSSLTETYHQAYQSKATDGFYMPVLSSSRDNPFHPPQPRAIAVYGSFLARGCLDPVSEAHEADGPTHDIYRLNVADDVAPLFNTGVVWFEGISPKFSLKLKTRTVLQYIPTSGSVLANFTRHEPTYDQIALDAADRLRNLMPHAYPAAYNDWGWLGDLLDSAISMLPGVGTVYNIAKPLIKPAWNWLGNKVSDFFGNPVARDGDIFFDAK
Capsid protein alpha B 520 Lake Sinai Virus 2 MNPPTTTTTTTRTIRAPKVQLTPNSATRRRRNRRRRRPAAAIAGPLSIQPSSINRRMVSRVTRRSAVVTAAGLAWLRQYLNPMGPDTTSVTGYPDGSAVTTCIADYSNTFNVSFPPREALYCTGSSSSEKPTLVDADNYAKIDKWSNYDITLCVLALPMLRNVVMLRLYPHTPTAFALTEQTPNFPQRFPNWSVYSADGTRFNNGDEPGYLQSYVYLPNVDKHLSAARGYRLLSRGITGIFSAPALETQGFVTACQYLAEGSIQSQSIKSDAVRSVTVNSDGTVKNVESSSQTVSSMPRYVFPLDGDNCAPSSLTETYHQAYQSKATDGFYMPVLSSSRDNPFHPPQPRAIAVYGSFLARGCLDPVSEAHEADGPTHDIYRLNVADDVAPLFNTGVVWFEGISPKFSLKLKTRTVLQYIPTSGSVLANFTRHEPTYDQIALDAADRLRNLMPHAYPAAYNDWGWLGDLLDSAISMLPGVGTVYNIAKPLIKPAWNWLGNKVSDFFGNPVARDGDIFFDAK
Capsid protein alpha C 520 Lake Sinai Virus 2 MNPPTTTTTTTRTIRAPKVQLTPNSATRRRRNRRRRRPAAAIAGPLSIQPSSINRRMVSRVTRRSAVVTAAGLAWLRQYLNPMGPDTTSVTGYPDGSAVTTCIADYSNTFNVSFPPREALYCTGSSSSEKPTLVDADNYAKIDKWSNYDITLCVLALPMLRNVVMLRLYPHTPTAFALTEQTPNFPQRFPNWSVYSADGTRFNNGDEPGYLQSYVYLPNVDKHLSAARGYRLLSRGITGIFSAPALETQGFVTACQYLAEGSIQSQSIKSDAVRSVTVNSDGTVKNVESSSQTVSSMPRYVFPLDGDNCAPSSLTETYHQAYQSKATDGFYMPVLSSSRDNPFHPPQPRAIAVYGSFLARGCLDPVSEAHEADGPTHDIYRLNVADDVAPLFNTGVVWFEGISPKFSLKLKTRTVLQYIPTSGSVLANFTRHEPTYDQIALDAADRLRNLMPHAYPAAYNDWGWLGDLLDSAISMLPGVGTVYNIAKPLIKPAWNWLGNKVSDFFGNPVARDGDIFFDAK
Capsid protein alpha D 520 Lake Sinai Virus 2 MNPPTTTTTTTRTIRAPKVQLTPNSATRRRRNRRRRRPAAAIAGPLSIQPSSINRRMVSRVTRRSAVVTAAGLAWLRQYLNPMGPDTTSVTGYPDGSAVTTCIADYSNTFNVSFPPREALYCTGSSSSEKPTLVDADNYAKIDKWSNYDITLCVLALPMLRNVVMLRLYPHTPTAFALTEQTPNFPQRFPNWSVYSADGTRFNNGDEPGYLQSYVYLPNVDKHLSAARGYRLLSRGITGIFSAPALETQGFVTACQYLAEGSIQSQSIKSDAVRSVTVNSDGTVKNVESSSQTVSSMPRYVFPLDGDNCAPSSLTETYHQAYQSKATDGFYMPVLSSSRDNPFHPPQPRAIAVYGSFLARGCLDPVSEAHEADGPTHDIYRLNVADDVAPLFNTGVVWFEGISPKFSLKLKTRTVLQYIPTSGSVLANFTRHEPTYDQIALDAADRLRNLMPHAYPAAYNDWGWLGDLLDSAISMLPGVGTVYNIAKPLIKPAWNWLGNKVSDFFGNPVARDGDIFFDAK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-05-04
Deposition Author(s): Chen, C.J. , Chen, N.C. , Chuankhayan, P. , Guan, H.H. , Lin, C.C. , Wang, C.H. , Yoshimura, M.