Structure of the seca/secye/proompa(4y)-sfgfp complex with adp
PDB DOI: 10.2210/pdb7xhb/pdb
Classification: TRANSLOCASE Organism(s): Ligusticum Chuanxiong , Adineta Vaga , Alistipes Finegoldii (Strain Dsm 17242 / Jcm 16770 / Ccug 46020 / Cip 107999 / Kctc 15236 / Ahn 2437)
Deposited: 2022-04-07 Deposition Author(s): Dong, L. , Li, L.
Method: ELECTRON MICROSCOPY Resolution: 3.33 Å
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Protein translocase subunit SecA | A | 778 | Ligusticum Chuanxiong , Adineta Vaga , Alistipes Finegoldii (Strain Dsm 17242 / Jcm 16770 / Ccug 46020 / Cip 107999 / Kctc 15236 / Ahn 2437) | MLGILNKMFDPTKRTLNRYEKIANDIDAIRGDYENLSDDALKHKTIEFKERLEKGATTDDLLVEAFAVVREASRRVTGMFPFKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQMGKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKAVQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDSFTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLKNKGIPHQVLNAKNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTMAMLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQRFEVIDSENLREIVENMIKSSLERAIAAYTPREELPEEWKLDGLVDLINTTYLDEGALEKSDIFGKEPDEMLELIMDRIITKYNEKEEQFGKEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIESIEDEVAKFVMKA |
Protein translocase subunit SecY | Y | 430 | Ligusticum Chuanxiong , Adineta Vaga , Alistipes Finegoldii (Strain Dsm 17242 / Jcm 16770 / Ccug 46020 / Cip 107999 / Kctc 15236 / Ahn 2437) | MFRTISNFMRVSDIRNKIIFTLLMLIVFRIGTFIPVPSVNTDVLKLQDQLNAFGVLNIFCGGALQNFSIFAMGVMPYITASIIVQLLQMDVVPKFAEWSKQGEMGRRKLAQFTRYFTIVLGFIQALGMSYGFNNLAGGMLIQNPGIGTYLLIAVVLTAGTAFLMWLGEQITAKGVGNGISIIIFAGIVSGIPTILNQIYAQQFENVGEDLFLRIVRLLLVALAVVAVIVGVIYIQQAFRKIPIQYAKRLEGRNPVGGHSTHLPLKVNPAGVIPVIFAVSFLIAPPTIASFFGTNDVTLWIRRTFDYTHPVGMTIYVVLIIAFTYFYAFVQVNPEQMADNLKKQGGYIPGIRPGKNTQEYVTRILYRLTLVGSLFLAFIAVLPVFFVNFANLPPSAQIGGTSLLIVVGVALETMKQLESQLVKRHYRGFIK |
Protein translocase subunit SecE | E | 60 | Ligusticum Chuanxiong , Adineta Vaga , Alistipes Finegoldii (Strain Dsm 17242 / Jcm 16770 / Ccug 46020 / Cip 107999 / Kctc 15236 / Ahn 2437) | MQRVTNFFKEVVRELKKVSWPNRKELVNYTAVVLATVAFFTVFFAVIDLGISQLIRLVFE |
Translocating peptide | B | 345 | Ligusticum Chuanxiong , Adineta Vaga , Alistipes Finegoldii (Strain Dsm 17242 / Jcm 16770 / Ccug 46020 / Cip 107999 / Kctc 15236 / Ahn 2437) | MAKKTAIAIAVALAGFATVASYAQYEDGCSGELERQHTFAGGARSIASGYYYYSGDKLPEGVLQSGGSGSKGEELFTGVVPILVELDGDVNGHKFSVRGEGEGDATNGKLTLKFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDGTYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNFNSHNVYITADKQKNGIKANFKIRHNVEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSVLSKDPNEKRDHMVLLEFVTAAGITHGSAGLEVLFQGPANGGSAWSHPQFEKGGGSGGGSGGGSWSHPQFEK |
Method: ELECTRON MICROSCOPY