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7XFZ

Cryoem structure of type iv-a csf-crrnasp14-dsdna ternary complex

PDB DOI: 10.2210/pdb7xfz/pdb

Classification: STRUCTURAL PROTEIN/RNA/DNA
Organism(s): Vibrio Nigripulchritudo , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2022-04-02
Deposition Author(s): Cui, N. , Huang, H.D. , Jia, N. , Zhang, J.T.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.0 Å

7xfz
Literature

Cryoem structure of type iv-a csf-crrnasp14-dsdna ternary complex

Cui, N. , Huang, H.D. , Jia, N. , Zhang, J.T.

Primary Citation of Related Structures: 7XFZ


Proteins
Molecule Chains Sequence Length Organism Sequence
Csf1 A 253 Vibrio Nigripulchritudo , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) HHHHHHHHHHMRYPSDIVDQVLKAGPDKGLLTWEGVDAACSHCSRPIQNGDLYSPSSVGAFFSDTRDLASTSRSICWRCVVLRKKPMLYGLSAAVVTQDGIYSISKDVNKAWLFTTPPPAPFLVVHSSSTMQHLSWRTPVTLDNRRIHVRYGPNLFIVRPEVVRKALSIADRVNEGQKKWVTPVYFDRKAAAMGHGLITRAGAEMLTQEEQEFFQSVTPGERWALSYLMHSKRPEPEVGECITEKVMTSLNKE
Csf3 B 220 Vibrio Nigripulchritudo , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MVNLKVTIDLSNPMMEPGDLLHLDALLGALRVSRARAEHGDAINPRDYHYDLPLERYQAPSGDWVFKASAFKLKRQLPNQMWMQTGRLSIVEAARHRQSGYLQLRAGKPNPAGGPFKTSIYHRPIVQAELTAFCVGDQQGIEALLSECRQIGGKRGVGFGQVAGFKVEPVAETDCPWSWRALPADADPRLVTSEHARCIAAIRGPYWDRTLHVEALAPTP
Csf2 C 348 Vibrio Nigripulchritudo , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MQIEVTVRNITPIFSAAPGSNYITIDGTINPPPGVSRFPLVRTRMMYVAADVGDGVIKSVPLQIVPGNTMRSLLRRTMLKHVIEPALVEKGNKLSIGAYATAYSGNATGNPDGVPSSFDEIATMRAHPFIGLFGGGPRMLEGRLMVDSLYPIHTNAERILGAGYENEMMSGPITQVVWARRMDPILNLGSSEDVEVINGGAVAANGWIQDLLANSKAAASKKKKAAADEDESDGAAEENGRGLKAFNAHEVVIPGLKWVWRISLDRPTDAQVGLVLLALNKMTNERIAGGHSKDYGRFVIDGVSLNGEQVWSQSGITGGEQYFDAVAEAIDGLSSKEFEQFAQSAKEA
Csf2 D 348 Vibrio Nigripulchritudo , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MQIEVTVRNITPIFSAAPGSNYITIDGTINPPPGVSRFPLVRTRMMYVAADVGDGVIKSVPLQIVPGNTMRSLLRRTMLKHVIEPALVEKGNKLSIGAYATAYSGNATGNPDGVPSSFDEIATMRAHPFIGLFGGGPRMLEGRLMVDSLYPIHTNAERILGAGYENEMMSGPITQVVWARRMDPILNLGSSEDVEVINGGAVAANGWIQDLLANSKAAASKKKKAAADEDESDGAAEENGRGLKAFNAHEVVIPGLKWVWRISLDRPTDAQVGLVLLALNKMTNERIAGGHSKDYGRFVIDGVSLNGEQVWSQSGITGGEQYFDAVAEAIDGLSSKEFEQFAQSAKEA
Csf5 H 268 Vibrio Nigripulchritudo , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MFVKQVFFDLGARIHADEARALVAKLLDDTQPGLVSALMNYMPASKTSKTEFPLVQFSNFNQGFALLGFGEVGAQILSDATPIIHDAMAKLFASRGQGVVVQVSSRDVPLSCEKRPYGLQYTVAKMVVQKKHEHRERLANPETGKVFLEGLFLRSLERQAAAVGMVLPRDLVVSFKGAERVSSVKLRPDSTLAHGSLRHAVFEVNARLGGLWSVGFLLSKGFGHINTDLQLGQGGTRHALSKWSHPQFEKGGGSGGGSGGWSHPQFEK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
crRNA e 43 NA GUGAACGGUGGAGCAACACCGCGUGUUCCCCGCAUACGCGGGX
TS f 36 NA CTGCCGCACTTGCGGTGTTGCTCCAGAAAGGGTGTT
NTS g 22 NA AACACCCTTTCTGGATTTATTT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-04-02
Deposition Author(s): Cui, N. , Huang, H.D. , Jia, N. , Zhang, J.T.