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7X9F

Crystal structure of actinomycin d-echinomycin-d(agcgcgt/acgcgct) complex

PDB DOI: 10.2210/pdb7x9f/pdb

Classification: DNA/ANTIBIOTIC
Organism(s): Streptomyces , Synthetic Construct

Deposited: 2022-03-15
Deposition Author(s): Hou, M.H. , Kao, S.H. , Satange, R.B.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.96 Å

7x9f
Literature

Crystal structure of actinomycin d-echinomycin-d(agcgcgt/acgcgct) complex

Hou, M.H. , Kao, S.H. , Satange, R.B.

Primary Citation of Related Structures: 7X9F


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*AP*CP*GP*CP*GP*CP*T)-3') f 7 NA ACGCGCT
DNA (5'-D(P*AP*CP*GP*CP*GP*CP*T)-3') d 7 NA ACGCGCT
DNA (5'-D(P*AP*GP*CP*GP*CP*GP*T)-3') o 7 NA AGCGCGT
DNA (5'-D(P*AP*GP*CP*GP*CP*GP*T)-3') b 7 NA AGCGCGT

Proteins
Molecule Chains Sequence Length Organism Sequence
DSN-ALA-N2C-MVA-DSN-ALA-NCY-MVA G 8 Streptomyces , Synthetic Construct SAXVSAXV
DSN-ALA-N2C-MVA-DSN-ALA-NCY-MVA C 8 Streptomyces , Synthetic Construct SAXVSAXV
THR-DVA-PRO-SAR-MVA-PXF-THR-DVA-PRO-SAR-MVA H 11 Streptomyces , Synthetic Construct TVPGVXTVPGV
THR-DVA-PRO-SAR-MVA-PXF-THR-DVA-PRO-SAR-MVA A 11 Streptomyces , Synthetic Construct TVPGVXTVPGV
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-03-15
Deposition Author(s): Hou, M.H. , Kao, S.H. , Satange, R.B.