7X46
Cryo-em structure of coxsackievirus b1 a-particle in complex with nab 2e6 (classified from cvb1 mature virion in complex with 8a10 and 2e6)
PDB DOI: 10.2210/pdb7x46/pdb
Classification: VIRUS Organism(s): Coxsackievirus B1 , Mus Musculus
Deposited: 2022-03-02 Deposition Author(s): Cheng, T. , Li, S. , Sun, H. , Xia, N. , Zheng, Q. , Zhu, R.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.85 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 2E6 light chain | L | 107 | Coxsackievirus B1 , Mus Musculus | DIQMTQSPASLSVSVGETVTITCRASENVYRNLAWYQQKQGKSPQLLVYAATNLADGVPSRFSGSGSGTQYSLKINSLQSEDFGSYFCQHFWSPVFTFGAGTKLELK |
| 2E6 heavy chain | H | 119 | Coxsackievirus B1 , Mus Musculus | QVQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGVIWRGGSTDYNAAFMSRLSITKDNSKSQVFFKMNSLQADDTAIYYCAKGDYYGYDAMDSWGQGTSVTVSR |
| Virion protein 1 | A | 278 | Coxsackievirus B1 , Mus Musculus | GPVEESVDRAVARVADTISSRPTNSESIPALTAAETGHTSQVVPSDTMQTRHVKNYHSRSESSIENFLCRSACVYYATYTNNSKKGFAEWVINTRQVAQLRRKLELFTYLRFDLELTFVITSAQQPSTASSVDAPVQTHQIMYVPPGGPVPTKVKDYAWQTSTNPSVFWTEGNAPPRMSIPFISIGNAYSCFYDGWTQFSRNGVYGINTLNNMGTLYMRHVNEAGQGPIKSTVRIYFKPKHVKAWVPRPPRLCQYEKQKNVNFSPIGVTTSRTDIITT |
| VP2 | B | 263 | Coxsackievirus B1 , Mus Musculus | SPSAEECGYSDRVRSITLGNSTITTQECANVVVGYGVWPEYLKDNEATAEDQPTQPDVATCRFYTLESVQWMKNSAGWWWKLPDALSQMGLFGQNMQYHYLGRTGYTIHVQCNASKFHQGCLLVVCVPEAEMGCSNLNNTPEFSELSGGDSARMFTDTQVGESNAKKVQTAVWNAGMGVGVGNLTIFPHQWINLRTNNSATLVMPYINSVPMDNMFRHNNLTLMIIPFVPLNYSEGSSPYVPITVTIAPMCAEYNGLRLASNQ |
| VP3 | C | 238 | Coxsackievirus B1 , Mus Musculus | GLPVMTTPGSTQFLTSDDFQSPSAMPQFDVTPEMQIPGRVNNLMEIAEVDSVVPVNNTEDNVSSLKAYQIPVQSNSDNGKQVFGFPLQPGANNVLNRTLLGEILNYYTHWSGSIKLTFMFCGSAMATGKFLLAYSPPGAGVPKNRKDAMLGTHVIWDVGLQSSCVLCVPWISQTHYRYVVEDEYTAAGYVTCWYQTNIVVPADVQSSCDILCFVSACNDFSVRMLKDTPFIRQDTFYQ |
Experimental Data
Method: ELECTRON MICROSCOPY