PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7X40

Cryo-em structure of coxsackievirus b1 mature virion in complex with nab 8a10 (classified from cvb1 mature virion in complex with 8a10 and 2e6)

PDB DOI: 10.2210/pdb7x40/pdb

Classification: VIRUS
Organism(s): Coxsackievirus B1 , Mus Musculus

Deposited: 2022-03-01
Deposition Author(s): Cheng, T. , Li, S. , Sun, H. , Xia, N. , Zheng, Q. , Zhu, R.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.02 Å

7x40
Literature

Cryo-em structure of coxsackievirus b1 mature virion in complex with nab 8a10 (classified from cvb1 mature virion in complex with 8a10 and 2e6)

Cheng, T. , Li, S. , Sun, H. , Xia, N. , Zheng, Q. , Zhu, R.

Primary Citation of Related Structures: 7X40


Proteins
Molecule Chains Sequence Length Organism Sequence
8A10 light chain L 108 Coxsackievirus B1 , Mus Musculus DIQMTQTKSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGSVKLLIYYTSTLHSGVPSRFSGSGSGTDYSLTINSLEQEDIATYFCQQGNTFPFTFGGGTKLEIRR
8A10 heavy chain H 118 Coxsackievirus B1 , Mus Musculus QVQLQQSAAELARPGASVKMSCKASGYTFTTYTMHWVKQRPGQGLEWIGYINPSSRYTEYNQKFKDKTTLTADKSSSTAYMQLSSLTFEDSAVYYCARRSEADRFVYWGQGTLVTVSA
Virion protein 1 A 278 Coxsackievirus B1 , Mus Musculus GPVEESVDRAVARVADTISSRPTNSESIPALTAAETGHTSQVVPSDTMQTRHVKNYHSRSESSIENFLCRSACVYYATYTNNSKKGFAEWVINTRQVAQLRRKLELFTYLRFDLELTFVITSAQQPSTASSVDAPVQTHQIMYVPPGGPVPTKVKDYAWQTSTNPSVFWTEGNAPPRMSIPFISIGNAYSCFYDGWTQFSRNGVYGINTLNNMGTLYMRHVNEAGQGPIKSTVRIYFKPKHVKAWVPRPPRLCQYEKQKNVNFSPIGVTTSRTDIITT
VP2 B 263 Coxsackievirus B1 , Mus Musculus SPSAEECGYSDRVRSITLGNSTITTQECANVVVGYGVWPEYLKDNEATAEDQPTQPDVATCRFYTLESVQWMKNSAGWWWKLPDALSQMGLFGQNMQYHYLGRTGYTIHVQCNASKFHQGCLLVVCVPEAEMGCSNLNNTPEFSELSGGDSARMFTDTQVGESNAKKVQTAVWNAGMGVGVGNLTIFPHQWINLRTNNSATLVMPYINSVPMDNMFRHNNLTLMIIPFVPLNYSEGSSPYVPITVTIAPMCAEYNGLRLASNQ
VP3 C 238 Coxsackievirus B1 , Mus Musculus GLPVMTTPGSTQFLTSDDFQSPSAMPQFDVTPEMQIPGRVNNLMEIAEVDSVVPVNNTEDNVSSLKAYQIPVQSNSDNGKQVFGFPLQPGANNVLNRTLLGEILNYYTHWSGSIKLTFMFCGSAMATGKFLLAYSPPGAGVPKNRKDAMLGTHVIWDVGLQSSCVLCVPWISQTHYRYVVEDEYTAAGYVTCWYQTNIVVPADVQSSCDILCFVSACNDFSVRMLKDTPFIRQDTFYQ
Capsid protein VP4 D 69 Coxsackievirus B1 , Mus Musculus MGAQVSTQKTGAHETGLNASGNSVIHYTNINYYKDAASNSANRQDFTQDPGKFTEPVKDIMVKTMPALN
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-03-01
Deposition Author(s): Cheng, T. , Li, S. , Sun, H. , Xia, N. , Zheng, Q. , Zhu, R.