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FASTA Sequence PDB Format mmCIF Format
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7X3C

Cryo-em structure of coxsackievirus b1 muture virion in complex with nabs 8a10 and 5f5 (cvb1-m:8a10:5f5)

PDB DOI: 10.2210/pdb7x3c/pdb

Classification: VIRUS
Organism(s): Coxsackievirus B1 , Mus Musculus

Deposited: 2022-02-28
Deposition Author(s): Cheng, T. , Li, S. , Sun, H. , Xia, N. , Zheng, Q. , Zhu, R.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.03 Å

Literature

Cryo-em structure of coxsackievirus b1 muture virion in complex with nabs 8a10 and 5f5 (cvb1-m:8a10:5f5)

Cheng, T. , Li, S. , Sun, H. , Xia, N. , Zheng, Q. , Zhu, R.

Primary Citation of Related Structures: 7X3C


Proteins
Molecule Chains Sequence Length Organism Sequence
8A10 light chain L 108 Coxsackievirus B1 , Mus Musculus DIQMTQTKSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGSVKLLIYYTSTLHSGVPSRFSGSGSGTDYSLTINSLEQEDIATYFCQQGNTFPFTFGGGTKLEIRR
8A10 heavy chain H 118 Coxsackievirus B1 , Mus Musculus QVQLQQSAAELARPGASVKMSCKASGYTFTTYTMHWVKQRPGQGLEWIGYINPSSRYTEYNQKFKDKTTLTADKSSSTAYMQLSSLTFEDSAVYYCARRSEADRFVYWGQGTLVTVSA
Virion protein 1 A 278 Coxsackievirus B1 , Mus Musculus GPVEESVDRAVARVADTISSRPTNSESIPALTAAETGHTSQVVPSDTMQTRHVKNYHSRSESSIENFLCRSACVYYATYTNNSKKGFAEWVINTRQVAQLRRKLELFTYLRFDLELTFVITSAQQPSTASSVDAPVQTHQIMYVPPGGPVPTKVKDYAWQTSTNPSVFWTEGNAPPRMSIPFISIGNAYSCFYDGWTQFSRNGVYGINTLNNMGTLYMRHVNEAGQGPIKSTVRIYFKPKHVKAWVPRPPRLCQYEKQKNVNFSPIGVTTSRTDIITT
VP2 B 263 Coxsackievirus B1 , Mus Musculus SPSAEECGYSDRVRSITLGNSTITTQECANVVVGYGVWPEYLKDNEATAEDQPTQPDVATCRFYTLESVQWMKNSAGWWWKLPDALSQMGLFGQNMQYHYLGRTGYTIHVQCNASKFHQGCLLVVCVPEAEMGCSNLNNTPEFSELSGGDSARMFTDTQVGESNAKKVQTAVWNAGMGVGVGNLTIFPHQWINLRTNNSATLVMPYINSVPMDNMFRHNNLTLMIIPFVPLNYSEGSSPYVPITVTIAPMCAEYNGLRLASNQ
VP3 C 238 Coxsackievirus B1 , Mus Musculus GLPVMTTPGSTQFLTSDDFQSPSAMPQFDVTPEMQIPGRVNNLMEIAEVDSVVPVNNTEDNVSSLKAYQIPVQSNSDNGKQVFGFPLQPGANNVLNRTLLGEILNYYTHWSGSIKLTFMFCGSAMATGKFLLAYSPPGAGVPKNRKDAMLGTHVIWDVGLQSSCVLCVPWISQTHYRYVVEDEYTAAGYVTCWYQTNIVVPADVQSSCDILCFVSACNDFSVRMLKDTPFIRQDTFYQ
Capsid protein VP4 D 69 Coxsackievirus B1 , Mus Musculus MGAQVSTQKTGAHETGLNASGNSVIHYTNINYYKDAASNSANRQDFTQDPGKFTEPVKDIMVKTMPALN
5F5 light chain E 106 Coxsackievirus B1 , Mus Musculus QIVLSQSPAILSASPGEKVTMTCRASSSVSYLHWYQQKPGSSPKPWISATSNLASGVPARFSGSGSGTSYSLTISRVEAEDAATYYCQQWSSNPLSFGGGTKLELK
5F5 heavy chain F 123 Coxsackievirus B1 , Mus Musculus EIQLQQSGPELVKPGASVKVSCKASGYSFTDYNIYWVKQSHGKSLEWIGYVDPYNGNTNYNQKFKGKATLTVDKSSSTAFMHLNSLTSEVSTVYYCARGGGYYGGGYYGMDYWGQGTSVTVSS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-02-28
Deposition Author(s): Cheng, T. , Li, S. , Sun, H. , Xia, N. , Zheng, Q. , Zhu, R.