Cryo-em structure of membrane-bound fructose dehydrogenase from gluconobacter japonicus
PDB DOI: 10.2210/pdb7wsq/pdb
Classification: OXIDOREDUCTASE Organism(s): Gluconobacter Japonicus
Deposited: 2022-02-01 Deposition Author(s): Kitazumi, Y. , Makino, F. , Miyata, T. , Namba, K. , Shirai, O. , Sowa, K. , Suzuki, Y. , Tanaka, H.
Method: ELECTRON MICROSCOPY Resolution: 3.8 Å
Cryo-em structure of membrane-bound fructose dehydrogenase from gluconobacter japonicus
Kitazumi, Y. , Makino, F. , Miyata, T. , Namba, K. , Shirai, O. , Sowa, K. , Suzuki, Y. , Tanaka, H.
Primary Citation of Related Structures: 7WSQ
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Fructose dehydrogenase large subunit | A | 544 | Gluconobacter Japonicus | MSNETLSADVVIIGAGICGSLLAHKLVRNGLSVLLLDAGPRRDRSQIVENWRNMPPDNKSQYDYATPYPSVPWAPHTNYFPDNNYLIVKGPDRTAYKQGIIKGVGGTTWHWAASSWRYLPNDFKLHSTYGVGRDYAMSYDELEPYYYEAECEMGVMGPNGEEITPSAPRQNPWPMTSMPYGYGDRTFTEIVSKLGFSNTPVPQARNSRPYDGRPQCCGNNNCMPICPIGAMYNGVYAAIKAEKLGAKIIPNAVVYAMETDAKNRITAISFYDPDKQSHRVVAKTFVIAANGIETPKLLLLAANDRNPHGIANSSDLVGRNMMDHPGIGMSFQSAEPIWAGGGSVQMSSITNFRDGDFRSEYAATQIGYNNTAQNSRAGMKALSMGLVGKKLDEEIRRRTAHGVDIYANHEVLPDPNNRLVLSKDYKDALGIPHPEVTYDVGEYVRKSAAISRQRLMDIAKAMGGTEIEMTPYFTPNNHITGGTIMGHDPRDSVVDKWLRTHDHSNLFLATGATMAASGTVNSTLTMAALSLRAADAILNDLKQG |
Fructose dehydrogenase large subunit | D | 544 | Gluconobacter Japonicus | MSNETLSADVVIIGAGICGSLLAHKLVRNGLSVLLLDAGPRRDRSQIVENWRNMPPDNKSQYDYATPYPSVPWAPHTNYFPDNNYLIVKGPDRTAYKQGIIKGVGGTTWHWAASSWRYLPNDFKLHSTYGVGRDYAMSYDELEPYYYEAECEMGVMGPNGEEITPSAPRQNPWPMTSMPYGYGDRTFTEIVSKLGFSNTPVPQARNSRPYDGRPQCCGNNNCMPICPIGAMYNGVYAAIKAEKLGAKIIPNAVVYAMETDAKNRITAISFYDPDKQSHRVVAKTFVIAANGIETPKLLLLAANDRNPHGIANSSDLVGRNMMDHPGIGMSFQSAEPIWAGGGSVQMSSITNFRDGDFRSEYAATQIGYNNTAQNSRAGMKALSMGLVGKKLDEEIRRRTAHGVDIYANHEVLPDPNNRLVLSKDYKDALGIPHPEVTYDVGEYVRKSAAISRQRLMDIAKAMGGTEIEMTPYFTPNNHITGGTIMGHDPRDSVVDKWLRTHDHSNLFLATGATMAASGTVNSTLTMAALSLRAADAILNDLKQG |
Fructose dehydrogenase small subunit | B | 183 | Gluconobacter Japonicus | MEKIADSGPVQIFLSRRKLLAFSGASLTVAAIGAPSKGSTQDVVASNRDSISDFMQLSAFATGHKNLDLNIGSALLLAFEAQKHDFSTQIKALREHITKNNYQDVEALDAAMKDDPLHPTLIQIIRAWYSGVIEDETNAKVYAFEKALMYQPSRDVVVIPTYAHNGPNYWVSEPASVDVMPAF |
Fructose dehydrogenase small subunit | E | 183 | Gluconobacter Japonicus | MEKIADSGPVQIFLSRRKLLAFSGASLTVAAIGAPSKGSTQDVVASNRDSISDFMQLSAFATGHKNLDLNIGSALLLAFEAQKHDFSTQIKALREHITKNNYQDVEALDAAMKDDPLHPTLIQIIRAWYSGVIEDETNAKVYAFEKALMYQPSRDVVVIPTYAHNGPNYWVSEPASVDVMPAF |
Fructose dehydrogenase cytochrome subunit | C | 486 | Gluconobacter Japonicus | MRYFRPLSATAMTTVLLLAGTNVRAQPTEPTPASAHRPSISRGHYLAIAADCAACHTNGRDGQFLAGGYAISSPMGNIYSTNITPSKTHGIGNYTLEQFSKALRHGIRADGAQLYPAMPYDAYNRLTDEDVKSLYAYIMTEVKPVDAPSPKTQLPFPFSIRASLGIWKIAARIEGKPYVFDHTHNDDWNRGRYLVDELAHCGECHTPRNFLLAPNQSAYLAGADIGSWRAPNITNAPQSGIGSWSDQDLFQYLKTGKTAHARAAGPMAEAIEHSLQYLPDADISAIVTYLRSVPAKAESGQTVANFEHAGRPSSYSVANANSRRSNSTLTKTTDGAALYEAVCASCHQSDGKGSKDGYYPSLVGNTTTGQLNPNDLIASILYGVDRTTDNHEILMPAFGPDSLVQPLTDEQIATIADYVLSHFGNAQATVSADAVKQVRAGGKQVPLAKLASPGVMLLLGTGGILGAILVVAGLWWLISRRKKRSA |
Fructose dehydrogenase cytochrome subunit | F | 486 | Gluconobacter Japonicus | MRYFRPLSATAMTTVLLLAGTNVRAQPTEPTPASAHRPSISRGHYLAIAADCAACHTNGRDGQFLAGGYAISSPMGNIYSTNITPSKTHGIGNYTLEQFSKALRHGIRADGAQLYPAMPYDAYNRLTDEDVKSLYAYIMTEVKPVDAPSPKTQLPFPFSIRASLGIWKIAARIEGKPYVFDHTHNDDWNRGRYLVDELAHCGECHTPRNFLLAPNQSAYLAGADIGSWRAPNITNAPQSGIGSWSDQDLFQYLKTGKTAHARAAGPMAEAIEHSLQYLPDADISAIVTYLRSVPAKAESGQTVANFEHAGRPSSYSVANANSRRSNSTLTKTTDGAALYEAVCASCHQSDGKGSKDGYYPSLVGNTTTGQLNPNDLIASILYGVDRTTDNHEILMPAFGPDSLVQPLTDEQIATIADYVLSHFGNAQATVSADAVKQVRAGGKQVPLAKLASPGVMLLLGTGGILGAILVVAGLWWLISRRKKRSA |
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-02-01 Deposition Author(s): Kitazumi, Y. , Makino, F. , Miyata, T. , Namba, K. , Shirai, O. , Sowa, K. , Suzuki, Y. , Tanaka, H.