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7WRV
The interface of jmb2002 fab binds to sars-cov-2 omicron variant s
PDB DOI: 10.2210/pdb7wrv/pdb
Classification: VIRAL PROTEIN Organism(s): Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2022-01-27 Deposition Author(s): Cao, X. , Cheng, X. , Deng, S.J. , Gu, C. , He, X. , Hu, W. , Huang, S. , Huang, Z. , Jia, F. , Jiang, H. , Jiang, Y. , Liu, J. , Liu, P. , Song, B. , Wang, X. , Wang, X. , Wang, Z. , Wu, C. , Wu, K. , Xia, K. , Xu, H.E. , Xu, P. , Xu, Y. , Yin, W. , Yuan, Q. , Zheng, J.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.47 Å
The interface of jmb2002 fab binds to sars-cov-2 omicron variant s
Cao, X. , Cheng, X. , Deng, S.J. , Gu, C. , He, X. , Hu, W. , Huang, S. , Huang, Z. , Jia, F. , Jiang, H. , Jiang, Y. , Liu, J. , Liu, P. , Song, B. , Wang, X. , Wang, X. , Wang, Z. , Wu, C. , Wu, K. , Xia, K. , Xu, H.E. , Xu, P. , Xu, Y. , Yin, W. , Yuan, Q. , Zheng, J.
Primary Citation of Related Structures: 7WRV
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Spike glycoprotein | C | 1205 | Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2 | MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVISGTNGTKRFDNPVLPFNDGVYFASIEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPIIVREPEDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLKGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTQTKSHGSASSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFKGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDIFSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQ |
| JMB2002 Fab heavy chain | U | 237 | Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2 | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGRIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCASLASYSSGWEDVFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTHHHHHH |
| JMB2002 Fab light chain | V | 215 | Mus Musculus , Severe Acute Respiratory Syndrome Coronavirus 2 | GDIQMTQSPSSLSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-01-27 Deposition Author(s): Cao, X. , Cheng, X. , Deng, S.J. , Gu, C. , He, X. , Hu, W. , Huang, S. , Huang, Z. , Jia, F. , Jiang, H. , Jiang, Y. , Liu, J. , Liu, P. , Song, B. , Wang, X. , Wang, X. , Wang, Z. , Wu, C. , Wu, K. , Xia, K. , Xu, H.E. , Xu, P. , Xu, Y. , Yin, W. , Yuan, Q. , Zheng, J.