Cryo-em structure of membrane-bound fructose dehydrogenase from gluconobacter japonicus
PDB DOI: 10.2210/pdb7w2j/pdb
Classification: OXIDOREDUCTASE Organism(s): Gluconobacter Japonicus
Deposited: 2021-11-24 Deposition Author(s): Kitazumi, Y. , Makino, F. , Miyata, T. , Namba, K. , Shirai, O. , Sowa, K. , Suzuki, Y. , Tanaka, H.
Method: ELECTRON MICROSCOPY Resolution: 3.6 Å
Cryo-em structure of membrane-bound fructose dehydrogenase from gluconobacter japonicus
Kitazumi, Y. , Makino, F. , Miyata, T. , Namba, K. , Shirai, O. , Sowa, K. , Suzuki, Y. , Tanaka, H.
Primary Citation of Related Structures: 7W2J
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Fructose dehydrogenase large subunit | A | 544 | Gluconobacter Japonicus | MSNETLSADVVIIGAGICGSLLAHKLVRNGLSVLLLDAGPRRDRSQIVENWRNMPPDNKSQYDYATPYPSVPWAPHTNYFPDNNYLIVKGPDRTAYKQGIIKGVGGTTWHWAASSWRYLPNDFKLHSTYGVGRDYAMSYDELEPYYYEAECEMGVMGPNGEEITPSAPRQNPWPMTSMPYGYGDRTFTEIVSKLGFSNTPVPQARNSRPYDGRPQCCGNNNCMPICPIGAMYNGVYAAIKAEKLGAKIIPNAVVYAMETDAKNRITAISFYDPDKQSHRVVAKTFVIAANGIETPKLLLLAANDRNPHGIANSSDLVGRNMMDHPGIGMSFQSAEPIWAGGGSVQMSSITNFRDGDFRSEYAATQIGYNNTAQNSRAGMKALSMGLVGKKLDEEIRRRTAHGVDIYANHEVLPDPNNRLVLSKDYKDALGIPHPEVTYDVGEYVRKSAAISRQRLMDIAKAMGGTEIEMTPYFTPNNHITGGTIMGHDPRDSVVDKWLRTHDHSNLFLATGATMAASGTVNSTLTMAALSLRAADAILNDLKQG |
| Fructose dehydrogenase large subunit | D | 544 | Gluconobacter Japonicus | MSNETLSADVVIIGAGICGSLLAHKLVRNGLSVLLLDAGPRRDRSQIVENWRNMPPDNKSQYDYATPYPSVPWAPHTNYFPDNNYLIVKGPDRTAYKQGIIKGVGGTTWHWAASSWRYLPNDFKLHSTYGVGRDYAMSYDELEPYYYEAECEMGVMGPNGEEITPSAPRQNPWPMTSMPYGYGDRTFTEIVSKLGFSNTPVPQARNSRPYDGRPQCCGNNNCMPICPIGAMYNGVYAAIKAEKLGAKIIPNAVVYAMETDAKNRITAISFYDPDKQSHRVVAKTFVIAANGIETPKLLLLAANDRNPHGIANSSDLVGRNMMDHPGIGMSFQSAEPIWAGGGSVQMSSITNFRDGDFRSEYAATQIGYNNTAQNSRAGMKALSMGLVGKKLDEEIRRRTAHGVDIYANHEVLPDPNNRLVLSKDYKDALGIPHPEVTYDVGEYVRKSAAISRQRLMDIAKAMGGTEIEMTPYFTPNNHITGGTIMGHDPRDSVVDKWLRTHDHSNLFLATGATMAASGTVNSTLTMAALSLRAADAILNDLKQG |
| Fructose dehydrogenase small subunit | B | 183 | Gluconobacter Japonicus | MEKIADSGPVQIFLSRRKLLAFSGASLTVAAIGAPSKGSTQDVVASNRDSISDFMQLSAFATGHKNLDLNIGSALLLAFEAQKHDFSTQIKALREHITKNNYQDVEALDAAMKDDPLHPTLIQIIRAWYSGVIEDETNAKVYAFEKALMYQPSRDVVVIPTYAHNGPNYWVSEPASVDVMPAF |
| Fructose dehydrogenase small subunit | E | 183 | Gluconobacter Japonicus | MEKIADSGPVQIFLSRRKLLAFSGASLTVAAIGAPSKGSTQDVVASNRDSISDFMQLSAFATGHKNLDLNIGSALLLAFEAQKHDFSTQIKALREHITKNNYQDVEALDAAMKDDPLHPTLIQIIRAWYSGVIEDETNAKVYAFEKALMYQPSRDVVVIPTYAHNGPNYWVSEPASVDVMPAF |
| Fructose dehydrogenase cytochrome subunit | C | 486 | Gluconobacter Japonicus | MRYFRPLSATAMTTVLLLAGTNVRAQPTEPTPASAHRPSISRGHYLAIAADCAACHTNGRDGQFLAGGYAISSPMGNIYSTNITPSKTHGIGNYTLEQFSKALRHGIRADGAQLYPAMPYDAYNRLTDEDVKSLYAYIMTEVKPVDAPSPKTQLPFPFSIRASLGIWKIAARIEGKPYVFDHTHNDDWNRGRYLVDELAHCGECHTPRNFLLAPNQSAYLAGADIGSWRAPNITNAPQSGIGSWSDQDLFQYLKTGKTAHARAAGPMAEAIEHSLQYLPDADISAIVTYLRSVPAKAESGQTVANFEHAGRPSSYSVANANSRRSNSTLTKTTDGAALYEAVCASCHQSDGKGSKDGYYPSLVGNTTTGQLNPNDLIASILYGVDRTTDNHEILMPAFGPDSLVQPLTDEQIATIADYVLSHFGNAQATVSADAVKQVRAGGKQVPLAKLASPGVMLLLGTGGILGAILVVAGLWWLISRRKKRSA |
| Fructose dehydrogenase cytochrome subunit | F | 486 | Gluconobacter Japonicus | MRYFRPLSATAMTTVLLLAGTNVRAQPTEPTPASAHRPSISRGHYLAIAADCAACHTNGRDGQFLAGGYAISSPMGNIYSTNITPSKTHGIGNYTLEQFSKALRHGIRADGAQLYPAMPYDAYNRLTDEDVKSLYAYIMTEVKPVDAPSPKTQLPFPFSIRASLGIWKIAARIEGKPYVFDHTHNDDWNRGRYLVDELAHCGECHTPRNFLLAPNQSAYLAGADIGSWRAPNITNAPQSGIGSWSDQDLFQYLKTGKTAHARAAGPMAEAIEHSLQYLPDADISAIVTYLRSVPAKAESGQTVANFEHAGRPSSYSVANANSRRSNSTLTKTTDGAALYEAVCASCHQSDGKGSKDGYYPSLVGNTTTGQLNPNDLIASILYGVDRTTDNHEILMPAFGPDSLVQPLTDEQIATIADYVLSHFGNAQATVSADAVKQVRAGGKQVPLAKLASPGVMLLLGTGGILGAILVVAGLWWLISRRKKRSA |
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-11-24 Deposition Author(s): Kitazumi, Y. , Makino, F. , Miyata, T. , Namba, K. , Shirai, O. , Sowa, K. , Suzuki, Y. , Tanaka, H.