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7VY3
Structure of photosynthetic lh1-rc super-complex of rhodobacter sphaeroides lacking protein-u
PDB DOI: 10.2210/pdb7vy3/pdb
Classification: PHOTOSYNTHESIS Organism(s): Rhodobacter Sphaeroides F. Sp. Denitrificans
Deposited: 2021-11-13 Deposition Author(s): Hall, M. , Humbel, B.M. , Kanno, R. , Kawamura, S. , Kikuchi, R. , Kimura, Y. , Madigan, M.T. , Mizoguchi, A. , Nagashima, K.V.P. , Takahashi, A. , Tani, K. , Wang-Otomo, Z.-Y. , Yu, L.-J.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.63 Å
Structure of photosynthetic lh1-rc super-complex of rhodobacter sphaeroides lacking protein-u
Hall, M. , Humbel, B.M. , Kanno, R. , Kawamura, S. , Kikuchi, R. , Kimura, Y. , Madigan, M.T. , Mizoguchi, A. , Nagashima, K.V.P. , Takahashi, A. , Tani, K. , Wang-Otomo, Z.-Y. , Yu, L.-J.
Primary Citation of Related Structures: 7VY3
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Photosynthetic reaction center L subunit | L | 281 | Rhodobacter Sphaeroides F. Sp. Denitrificans | ALLSFERKYRVPGGTLVGGNLFDFWVGPFYVGFFGVATFFFAALGIILIAWSAVLQGTWNPQLISVYPPALEYGLGGAPLAKGGLWQIITICATGAFVSWALREVEICRKLGIGYHIPFAFAFAILAYLTLVLFRPVMMGAWGYAFPYGIWTHLDWVSNTGYTYGNFHYNPAHMIAITFFFTNALALALHGALVLSAANPEKGKEMRTPDHEDTFFRDLVGYSIGTLGIHRLGLLLSLSAVFFSALCMIITGTIWFDQWVDWWQWWVKLPWWANIPGGING |
| Reaction center protein M chain | M | 307 | Rhodobacter Sphaeroides F. Sp. Denitrificans | AEYQNIFTQVQVRGPADLGMTEDVNLANRSGVGPFSTLLGWFGNAQLGPIYLGSLGVLSLFSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFSLEPPAPEYGLSFAAPLKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILMGSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATILAVSRFGGERELEQIADRGTAAERAALFWRWTMGFNATMEGIHRWAIWMAVLVTLTGGIGILLSGTVVDNWYVWGQNHGMAPLN |
| Photosynthetic reaction center subunit H | H | 260 | Rhodobacter Sphaeroides F. Sp. Denitrificans | MVGVTAFGNFDLASLAIYSFWIFLAGLIYYLQTENMREGYPLENEDGTPAANQGPFPLPKPKTFILPHGRGTLTVPGPESEDRPIALARTAVSEGFPHAPTGDPMKDGVGPASWVARRDLPELDGHGHNKIKPMKAAAGFYVSAGKNPIGLPVRGCDLEIAGKVVDIWVDIPEQMARFLEVELKDGSTRLLPMQMVKVQSNRVHVNALSSDLFAGIPTIKSPTEVTLLEEDKICGYVAGGLMYAAPKRKSVVAAMLAEYA |
| Antenna pigment protein alpha chain | A | 54 | Rhodobacter Sphaeroides F. Sp. Denitrificans | MSKFYKIWMIFDPRRVFVAQGVFLFLLAVMIHLILLSTPSYNWLEISAAKYNRV |
| Antenna pigment protein alpha chain | D | 54 | Rhodobacter Sphaeroides F. Sp. Denitrificans | MSKFYKIWMIFDPRRVFVAQGVFLFLLAVMIHLILLSTPSYNWLEISAAKYNRV |
| Antenna pigment protein alpha chain | F | 54 | Rhodobacter Sphaeroides F. Sp. Denitrificans | MSKFYKIWMIFDPRRVFVAQGVFLFLLAVMIHLILLSTPSYNWLEISAAKYNRV |
| Antenna pigment protein alpha chain | I | 54 | Rhodobacter Sphaeroides F. Sp. Denitrificans | MSKFYKIWMIFDPRRVFVAQGVFLFLLAVMIHLILLSTPSYNWLEISAAKYNRV |
| Antenna pigment protein alpha chain | K | 54 | Rhodobacter Sphaeroides F. Sp. Denitrificans | MSKFYKIWMIFDPRRVFVAQGVFLFLLAVMIHLILLSTPSYNWLEISAAKYNRV |
| Antenna pigment protein alpha chain | O | 54 | Rhodobacter Sphaeroides F. Sp. Denitrificans | MSKFYKIWMIFDPRRVFVAQGVFLFLLAVMIHLILLSTPSYNWLEISAAKYNRV |
| Antenna pigment protein alpha chain | Q | 54 | Rhodobacter Sphaeroides F. Sp. Denitrificans | MSKFYKIWMIFDPRRVFVAQGVFLFLLAVMIHLILLSTPSYNWLEISAAKYNRV |
| Antenna pigment protein alpha chain | S | 54 | Rhodobacter Sphaeroides F. Sp. Denitrificans | MSKFYKIWMIFDPRRVFVAQGVFLFLLAVMIHLILLSTPSYNWLEISAAKYNRV |
| Antenna pigment protein alpha chain | V | 54 | Rhodobacter Sphaeroides F. Sp. Denitrificans | MSKFYKIWMIFDPRRVFVAQGVFLFLLAVMIHLILLSTPSYNWLEISAAKYNRV |
| Antenna pigment protein alpha chain | Y | 54 | Rhodobacter Sphaeroides F. Sp. Denitrificans | MSKFYKIWMIFDPRRVFVAQGVFLFLLAVMIHLILLSTPSYNWLEISAAKYNRV |
| Antenna pigment protein alpha chain | 1 | 54 | Rhodobacter Sphaeroides F. Sp. Denitrificans | MSKFYKIWMIFDPRRVFVAQGVFLFLLAVMIHLILLSTPSYNWLEISAAKYNRV |
| Antenna pigment protein beta chain | B | 48 | Rhodobacter Sphaeroides F. Sp. Denitrificans | ADKSDLGYTGLTDEQAQELHSVYMSGLWLFSAVAIVAHLAVYIWRPWF |
| Antenna pigment protein beta chain | E | 48 | Rhodobacter Sphaeroides F. Sp. Denitrificans | ADKSDLGYTGLTDEQAQELHSVYMSGLWLFSAVAIVAHLAVYIWRPWF |
| Antenna pigment protein beta chain | G | 48 | Rhodobacter Sphaeroides F. Sp. Denitrificans | ADKSDLGYTGLTDEQAQELHSVYMSGLWLFSAVAIVAHLAVYIWRPWF |
| Antenna pigment protein beta chain | J | 48 | Rhodobacter Sphaeroides F. Sp. Denitrificans | ADKSDLGYTGLTDEQAQELHSVYMSGLWLFSAVAIVAHLAVYIWRPWF |
| Antenna pigment protein beta chain | N | 48 | Rhodobacter Sphaeroides F. Sp. Denitrificans | ADKSDLGYTGLTDEQAQELHSVYMSGLWLFSAVAIVAHLAVYIWRPWF |
| Antenna pigment protein beta chain | P | 48 | Rhodobacter Sphaeroides F. Sp. Denitrificans | ADKSDLGYTGLTDEQAQELHSVYMSGLWLFSAVAIVAHLAVYIWRPWF |
| Antenna pigment protein beta chain | R | 48 | Rhodobacter Sphaeroides F. Sp. Denitrificans | ADKSDLGYTGLTDEQAQELHSVYMSGLWLFSAVAIVAHLAVYIWRPWF |
| Antenna pigment protein beta chain | T | 48 | Rhodobacter Sphaeroides F. Sp. Denitrificans | ADKSDLGYTGLTDEQAQELHSVYMSGLWLFSAVAIVAHLAVYIWRPWF |
| Antenna pigment protein beta chain | W | 48 | Rhodobacter Sphaeroides F. Sp. Denitrificans | ADKSDLGYTGLTDEQAQELHSVYMSGLWLFSAVAIVAHLAVYIWRPWF |
| Antenna pigment protein beta chain | Z | 48 | Rhodobacter Sphaeroides F. Sp. Denitrificans | ADKSDLGYTGLTDEQAQELHSVYMSGLWLFSAVAIVAHLAVYIWRPWF |
| PufX | X | 81 | Rhodobacter Sphaeroides F. Sp. Denitrificans | ADKTIFNDHLNTNPKTNLRLWVAFQMMKGAGWAGGVFFGTLLLIGFFRVVGRMLPIDENPAPAPNITGALETGIELIKHLV |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-11-13 Deposition Author(s): Hall, M. , Humbel, B.M. , Kanno, R. , Kawamura, S. , Kikuchi, R. , Kimura, Y. , Madigan, M.T. , Mizoguchi, A. , Nagashima, K.V.P. , Takahashi, A. , Tani, K. , Wang-Otomo, Z.-Y. , Yu, L.-J.