7VRJ
Structure of photosynthetic lh1-rc super-complex of allochromatium tepidum
PDB DOI: 10.2210/pdb7vrj/pdb
Classification: PHOTOSYNTHESIS Organism(s): Allochromatium Tepidum
Deposited: 2021-10-23 Deposition Author(s): Hall, M. , Hosogi, N. , Humbel, B.M. , Ishikawa, I. , Ji, X.-C. , Kanno, R. , Kimura, Y. , Kobayashi, K. , Madigan, M.T. , Mizoguchi, A. , Nagashima, K.V.P. , Nagashima, S. , Okura, Y. , Tani, K. , Tsukatani, Y. , Wang-Otomo, Z.-Y. , Yu, L.-J.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.81 Å
Structure of photosynthetic lh1-rc super-complex of allochromatium tepidum
Hall, M. , Hosogi, N. , Humbel, B.M. , Ishikawa, I. , Ji, X.-C. , Kanno, R. , Kimura, Y. , Kobayashi, K. , Madigan, M.T. , Mizoguchi, A. , Nagashima, K.V.P. , Nagashima, S. , Okura, Y. , Tani, K. , Tsukatani, Y. , Wang-Otomo, Z.-Y. , Yu, L.-J.
Primary Citation of Related Structures: 7VRJ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Photosynthetic reaction center cytochrome c subunit | C | 405 | Allochromatium Tepidum | MNLGKQLTLPAVAVVASVVLLGCERPPPEVVQKGYRGVAMEQNYNPRLLEASLKQNLPVESLPAAAPGGPKVSDVYQNVQVLKDLSVAEFTRTMVAVTTWVSPKEGCNYCHVPGNWASDDIYTKVVSRRMFEMVRAANSDWKQHVAVNGTGVTCYTCHRGNPVPKYVWVTDPGPNQPSGVKPTGQNYASSTVAYAALPFDPYTPFLDQTNEIRVIGQTALPAGNTTSLKQAEWTYGLMMQISDSLGVNCTFCHNSRAFYDWKQSTPQRTTAWYAIRHVRDINQNYIWPLNDVLPASRKGPYGDPFKVGCMTCHQGAYRPLYGAQMAKDYPALYASAPAEAEVAAPAEAAPVEDVAAAPVEEAAPAEAASAEEAPAAEEVAPAPVEEAPAAEAAPVEDAAPAPQQL |
| Photosynthetic reaction center L subunit | L | 277 | Allochromatium Tepidum | AMLSFERKYRVRGGTLIGGDLFDFWVGPFYVGFFGVTGFFFALLGVLLIVWGATIGPNAELQTYNIWQISIAPPDLSYGLGMAPLTEGGLWQIITICAIGAFVSWALREVEICRKLGIGFHIPFAFAFAIGAYLVLVVVRPILMGAWGHGFPYGILSHLDWVSNVGYQFLHFHYNPAHMLAITFFFTNCLALSMHGSLILSVTNPQKGEEVKTSEHENTFFRDIVGYSIGALAIHRLGLFLALSAVFWSAVCIVISGPFWTRGWPEWWNWWLELPLW |
| Photosynthetic reaction center M subunit | M | 324 | Allochromatium Tepidum | PEYQNIFTAVQVRAPAYPGVPLPKGHLPRIGRPIFSYWLGKIGDAQIGPIYLGFTGTLSIIFGFIAIFIIGFNMLASVDWNIIQFVKHFFWLGLEPPAPQYGLSIPPLSEGGWWLMAGFFLTMSIILWWVRTYKRAEALGMSQHLSWAFAAAIFFYLSLGFIRPVMMGSWAEAVPFGIFPHLDWTAAFSIRYGNLYYNPFHMLSIAFLYGSALLFAMHGATILAVSRFGGDREIDQITDRGTAAERAAIFWRWTMGFNASMESIHRWAWWCAVLTVITAGIGILLTGTVVENWYLWAIKHGVAPAYPEVVTAVDPYATATGVTQ |
| Photosynthetic reaction center H subunit | H | 259 | Allochromatium Tepidum | MSAAITEYMDVAQLTIWAFWFFFAGLIIYLRREDKREGYPLDSDRTERSGGRVKVVGFPDLADPKTFVLPHNAGTVMAPRVEAPTSINATPVAPFPGAPFEPNGDPMLSGFGPAASPDRAKHCDLTFEGLPKIVPMRVATDFSIADKDPDPRGMTVVGLDGEVAGTISDIWVDRSEPQIRYLEVDVSATKKKVLLPIGFSRFDKKAGKVKVAAIKAAHFANVPALSKPDQITLYEEDKVCAYYAGGKLYATAERAGPLL |
| Light-harvesting protein LH1 alpha2 | A | 44 | Allochromatium Tepidum | MHKIWQIFDPRRTLVALFGFLFVLGLLIHFILLSSPAFNWLSGS |
| Light-harvesting protein LH1 alpha2 | I | 44 | Allochromatium Tepidum | MHKIWQIFDPRRTLVALFGFLFVLGLLIHFILLSSPAFNWLSGS |
| Light-harvesting protein LH1 alpha2 | K | 44 | Allochromatium Tepidum | MHKIWQIFDPRRTLVALFGFLFVLGLLIHFILLSSPAFNWLSGS |
| Light-harvesting protein LH1 alpha2 | O | 44 | Allochromatium Tepidum | MHKIWQIFDPRRTLVALFGFLFVLGLLIHFILLSSPAFNWLSGS |
| Light-harvesting protein LH1 alpha2 | Q | 44 | Allochromatium Tepidum | MHKIWQIFDPRRTLVALFGFLFVLGLLIHFILLSSPAFNWLSGS |
| Light-harvesting protein LH1 alpha2 | 1 | 44 | Allochromatium Tepidum | MHKIWQIFDPRRTLVALFGFLFVLGLLIHFILLSSPAFNWLSGS |
| Light-harvesting protein LH1 alpha2 | 5 | 44 | Allochromatium Tepidum | MHKIWQIFDPRRTLVALFGFLFVLGLLIHFILLSSPAFNWLSGS |
| Light-harvesting protein LH1 alpha2 | 7 | 44 | Allochromatium Tepidum | MHKIWQIFDPRRTLVALFGFLFVLGLLIHFILLSSPAFNWLSGS |
| Light-harvesting protein LH1 alpha2 | 9 | 44 | Allochromatium Tepidum | MHKIWQIFDPRRTLVALFGFLFVLGLLIHFILLSSPAFNWLSGS |
| Light-harvesting protein LH1 beta1 | B | 46 | Allochromatium Tepidum | MANSSMTGLTEQEAQEFHGIFVQSMTAFFGIVVIAHILAWLWRPWL |
| Light-harvesting protein LH1 beta1 | J | 46 | Allochromatium Tepidum | MANSSMTGLTEQEAQEFHGIFVQSMTAFFGIVVIAHILAWLWRPWL |
| Light-harvesting protein LH1 beta1 | N | 46 | Allochromatium Tepidum | MANSSMTGLTEQEAQEFHGIFVQSMTAFFGIVVIAHILAWLWRPWL |
| Light-harvesting protein LH1 beta1 | P | 46 | Allochromatium Tepidum | MANSSMTGLTEQEAQEFHGIFVQSMTAFFGIVVIAHILAWLWRPWL |
| Light-harvesting protein LH1 beta1 | R | 46 | Allochromatium Tepidum | MANSSMTGLTEQEAQEFHGIFVQSMTAFFGIVVIAHILAWLWRPWL |
| Light-harvesting protein LH1 beta1 | 2 | 46 | Allochromatium Tepidum | MANSSMTGLTEQEAQEFHGIFVQSMTAFFGIVVIAHILAWLWRPWL |
| Light-harvesting protein LH1 beta1 | 4 | 46 | Allochromatium Tepidum | MANSSMTGLTEQEAQEFHGIFVQSMTAFFGIVVIAHILAWLWRPWL |
| Light-harvesting protein LH1 beta1 | 6 | 46 | Allochromatium Tepidum | MANSSMTGLTEQEAQEFHGIFVQSMTAFFGIVVIAHILAWLWRPWL |
| Light-harvesting protein LH1 beta1 | 8 | 46 | Allochromatium Tepidum | MANSSMTGLTEQEAQEFHGIFVQSMTAFFGIVVIAHILAWLWRPWL |
| Light-harvesting protein LH1 beta1 | 0 | 46 | Allochromatium Tepidum | MANSSMTGLTEQEAQEFHGIFVQSMTAFFGIVVIAHILAWLWRPWL |
| Light-harvesting protein LH1 alpha1 | D | 64 | Allochromatium Tepidum | MSPDLWKIWLLIDPRRVLIAVFAFLTILGLAIHMILLSTTEFNWLEDGIPAAKVQQVTPVVPQR |
| Light-harvesting protein LH1 alpha1 | F | 64 | Allochromatium Tepidum | MSPDLWKIWLLIDPRRVLIAVFAFLTILGLAIHMILLSTTEFNWLEDGIPAAKVQQVTPVVPQR |
| Light-harvesting protein LH1 alpha1 | S | 64 | Allochromatium Tepidum | MSPDLWKIWLLIDPRRVLIAVFAFLTILGLAIHMILLSTTEFNWLEDGIPAAKVQQVTPVVPQR |
| Light-harvesting protein LH1 alpha1 | U | 64 | Allochromatium Tepidum | MSPDLWKIWLLIDPRRVLIAVFAFLTILGLAIHMILLSTTEFNWLEDGIPAAKVQQVTPVVPQR |
| Light-harvesting protein LH1 alpha1 | W | 64 | Allochromatium Tepidum | MSPDLWKIWLLIDPRRVLIAVFAFLTILGLAIHMILLSTTEFNWLEDGIPAAKVQQVTPVVPQR |
| Light-harvesting protein LH1 alpha1 | Y | 64 | Allochromatium Tepidum | MSPDLWKIWLLIDPRRVLIAVFAFLTILGLAIHMILLSTTEFNWLEDGIPAAKVQQVTPVVPQR |
| Light-harvesting protein LH1 beta3 | E | 47 | Allochromatium Tepidum | MADQKSMTGLTEDEAKEFHGIFTQSMTMFFGIVIIAHILAWLWRPWL |
| Light-harvesting protein LH1 beta3 | G | 47 | Allochromatium Tepidum | MADQKSMTGLTEDEAKEFHGIFTQSMTMFFGIVIIAHILAWLWRPWL |
| Light-harvesting protein LH1 beta3 | T | 47 | Allochromatium Tepidum | MADQKSMTGLTEDEAKEFHGIFTQSMTMFFGIVIIAHILAWLWRPWL |
| Light-harvesting protein LH1 beta3 | V | 47 | Allochromatium Tepidum | MADQKSMTGLTEDEAKEFHGIFTQSMTMFFGIVIIAHILAWLWRPWL |
| Light-harvesting protein LH1 beta3 | X | 47 | Allochromatium Tepidum | MADQKSMTGLTEDEAKEFHGIFTQSMTMFFGIVIIAHILAWLWRPWL |
| Light-harvesting protein LH1 beta3 | Z | 47 | Allochromatium Tepidum | MADQKSMTGLTEDEAKEFHGIFTQSMTMFFGIVIIAHILAWLWRPWL |
| Light-harvesting protein LH1 alpha3 | 3 | 67 | Allochromatium Tepidum | MMPQQLYKIWLAFDPRMALIGLGAFLFALALFIHYMLLSSPGFDWLLGPDHAPVALSAGMSALPAGR |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-10-23 Deposition Author(s): Hall, M. , Hosogi, N. , Humbel, B.M. , Ishikawa, I. , Ji, X.-C. , Kanno, R. , Kimura, Y. , Kobayashi, K. , Madigan, M.T. , Mizoguchi, A. , Nagashima, K.V.P. , Nagashima, S. , Okura, Y. , Tani, K. , Tsukatani, Y. , Wang-Otomo, Z.-Y. , Yu, L.-J.