7VBZ
Matrix arm of active state ci from rotenone-nadh dataset
PDB DOI: 10.2210/pdb7vbz/pdb
Classification: ELECTRON TRANSPORT Organism(s): Human Metapneumovirus
Deposited: 2021-09-01 Deposition Author(s): Gu, J.K. , Yang, M.J.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.4 Å
Matrix arm of active state ci from rotenone-nadh dataset
Primary Citation of Related Structures: 7VBZ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial | A | 433 | Human Metapneumovirus | APKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVIGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQQFALQHQ |
| NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial | K | 43 | Human Metapneumovirus | FDNSTYRNLQHHEYSTYTFLDLNVELSKFRMPQPSSGRQSPRH |
| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial | L | 125 | Human Metapneumovirus | QLIAVDEKLDITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWSSTADPLSNLVLTFSTKEDAVAFAEKNGWSFDVEERKVPKPKSKSYGANFSWNKRTRVSTK |
| NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial | M | 690 | Human Metapneumovirus | SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTARPWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLTQPMIRNEKGLLTYTTWEDALSRVAGMLQSFQGNDVAAIAGGLVDAEALVALKDLLNRVDSDSLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVILLVGTNPRFEAPLFNARIRKSWLHNDLKVALIGSPVDLTYRYDHLGDSPKILQDIASGNHPFSQILKEAKKPMVVLGSSALQRSDGTAILAAVSNIAQNIRLSSGVTGDWKVMNILHRIASQVAALDLGYKPGVEAIRKNPPKVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPMADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRSRLEEVSPNLVRYDDVEGANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKCVKAVTEGI |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 | N | 144 | Human Metapneumovirus | ELVQVLRRGLQQVSGHGGLRGYLRVLFRANDVRVGTLVGEDKYGNKYYEDNKQFFGRHRWVIYTTEMNGRDTFWDVDGSMVPPEWHRWLHCMTDDPPTTKPPTARKYIWTNHKFNVSGTPQQYVPYSTTRKKIQEWVPPSTPYK |
| NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial | O | 217 | Human Metapneumovirus | GAGGALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNGWLPISAMNKVAEILQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQINDNYYEDLTPKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLTEPPKGPGFGVQAGL |
| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial | P | 208 | Human Metapneumovirus | TRPTIRPRNDVVHKQLSAFGQYVAEILPKYVQQVQVSCFNELEIFIHPDGVIPVLTFLRDHTNAQFKSLADLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESSVTVYKAANWYEREIWDMFGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPAYRQPPE |
| NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial | Q | 386 | Human Metapneumovirus | SNLTLNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIQPPPRAQWIRVLFGEITRLLNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYERVSGARMHAAYIRPGGVHQDLPLGLLDDIYEFSKNFSFRIDELEEMLTNNRIWRNRTVDIGVVTAEDALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPIGSRGDCYDRYLCRVEEMRQSLRIISQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEVDR |
| NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial | T | 96 | Human Metapneumovirus | GVRTSPTGEKVTHTGQAYDDGDYRRVRFSDRQKEVNENFAIDLIAEQPVSEVGSRVISCDGGGGALGHPRVYINLDKETKTGTCGYCGLQFRQPHH |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 | W | 29 | Human Metapneumovirus | ASKVKQDMPPPGGYGPIDYKRNLPRRGLS |
| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial | B | 176 | Human Metapneumovirus | TYKFVNMREPSMDMKSVTDRAAQTLLWTELVRGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEAEIAANIQADYLYR |
| NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial | C | 156 | Human Metapneumovirus | SRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREKRLRIWYRR |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | E | 115 | Human Metapneumovirus | GTSVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHLFQLDISVKQGRDKVREMFMKNAHVTDPRVVDLLVIKGKMELEETINVWKQRTHIMRFFHETEAPRPTDFLSKFYVGHDP |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 | F | 86 | Human Metapneumovirus | LGLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQEKNVSLNNFSADQVTRTLENVLSGKA |
| Acyl carrier protein, mitochondrial | G | 88 | Human Metapneumovirus | SDAPPLTLEAIKDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIADKKDVYE |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | H | 112 | Human Metapneumovirus | LKKTTGLVGLAVCETPHERLKILYTKILDVLGQIPKNAAYRKYTEQITNEKLGMVKAEPDVKKLEEQLQGGQIEEVILQAENELSLARKMLRWKPWEPLVEEPPANQWKWPI |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 | I | 112 | Human Metapneumovirus | ASATRVIQLLRNWASGRDLQAKLQLRYQEISKRTQPPPKLPVGPSHKLSNNYYCTRDGRREAMPPSIVMSSQKVLASGKPAESSAVAETEKKAVTPAPPIKRWELSKDQPYL |
| NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9, mitochondrial | J | 342 | Human Metapneumovirus | LHHALIPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCEPYDTMHLRPMGDLGQIIFMEWNGKDKDSIRKVVEHSNVVINLVGREWETKNFDFEDVFVKIPHAIAQVSKEAGVEKLIHISHLNADIKSPSRYLRSKAVGEKEVRAAFPEATIIKPSDIFGREDRFLNYFASMRWFGGVPLISLGKETVKQPVYIVDVSKGIINAIKDPDAKGKTFAFVGPNRYLLFDLVQYIFAVAYRPFLPYPLPHFAYRWVGRLFEVSPFEPWTTRDKVERVHMSDMTLPHLPGLEDLGIQATPLELKAIEVLRRHRTYRWLTSEMEDVKPAKTVNI |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-09-01 Deposition Author(s): Gu, J.K. , Yang, M.J.