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FASTA Sequence PDB Format mmCIF Format
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7V94

Cryo-em structure of the cas12c2-sgrna-target dna ternary complex

PDB DOI: 10.2210/pdb7v94/pdb

Classification: RNA BINDING PROTEIN/RNA/DNA
Organism(s): Uncultured Archaeon , Synthetic Construct

Deposited: 2021-08-24
Deposition Author(s): Hirano, H. , Kobayashi, K. , Kurihara, N. , Kusakizako, T. , Nishimasu, H. , Nishizawa, T. , Nureki, O. , Tomita, A. , Yamashita, K.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.7 Å

7v94
Literature

Cryo-em structure of the cas12c2-sgrna-target dna ternary complex

Hirano, H. , Kobayashi, K. , Kurihara, N. , Kusakizako, T. , Nishimasu, H. , Nishizawa, T. , Nureki, O. , Tomita, A. , Yamashita, K.

Primary Citation of Related Structures: 7V94


Proteins
Molecule Chains Sequence Length Organism Sequence
Cas12c2 A 1232 Uncultured Archaeon , Synthetic Construct MKIEEGKGHHHHHHMTKHSIPLHAFRNSGADARKWKGRIALLAKRGKETMRTLQFPLEMSEPEAAAINTTPFAVAYNAIEGTGKGTLFDYWAKLHLAGFRFFPSGGAATIFRQQAVFEDASWNAAFCQQSGKDWPWLVPSKLYERFTKAPREVAKKDGSKKSIEFTQENVANESHVSLVGASITDKTPEDQKEFFLKMAGALAEKFDSWKSANEDRIVAMKVIDEFLKSEGLHLPSLENIAVKCSVETKPDNATVAWHDAPMSGVQNLAIGVFATCASRIDNIYDLNGGKLSKLIQESATTPNVTALSWLFGKGLEYFRTTDIDTIMQDFNIPASAKESIKPLVESAQAIPTMTVLGKKNYAPFRPNFGGKIDSWIANYASRLMLLNDILEQIEPGFELPQALLDNETLMSGIDMTGDELKELIEAVYAWVDAAKQGLATLLGRGGNVDDAVQTFEQFSAMMDTLNGTLNTISARYVRAVEMAGKDEARLEKLIECKFDIPKWCKSVPKLVGISGGLPKVEEEIKVMNAAFKDVRARMFVRFEEIAAYVASKGAGMDVYDALEKRELEQIKKLKSAVPERAHIQAYRAVLHRIGRAVQNCSEKTKQLFSSKVIEMGVFKNPSHLNNFIFNQKGAIYRSPFDRSRHAPYQLHADKLLKNDWLELLAEISATLMASESTEQMEDALRLERTRLQLQLSGLPDWEYPASLAKPDIEVEIQTALKMQLAKDTVTSDVLQRAFNLYSSVLSGLTFKLLRRSFSLKMRFSVADTTQLIYVPKVCDWAIPKQYLQAEGEIGIAARVVTESSPAKMVTEVEMKEPKALGHFMQQAPHDWYFDASLGGTQVAGRIVEKGKEVGKERKLVGYRMRGNSAYKTVLDKSLVGNTELSQCSMIIEIPYTQTVDADFRAQVQAGLPKVSINLPVKETITASNKDEQMLFDRFVAIDLGERGLGYAVFDAKTLELQESGHRPIKAITNLLNRTHHYEQRPNQRQKFQAKFNVNLSELRENTVGDVCHQINRICAYYNAFPVLEYMVPDRLDKQLKSVYESVTNRYIWSSTDAHKSARVQFWLGGETWEHPYLKSAKDKKPLVLSPGRGASGKGTSQTCSCCGRNPFDLIKDMKPRAKIAVVDGKAKLENSELKLFERNLESKDDMLARRHRNERAGMEQPLTPGNYTVDEIKALLRANLRRAPKNRRTKDTTVSEYHCVFSDCGKTMHADENAAVNIGGKFIADIEK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
sgRNA b 112 NA GGAUACCACCCGUGCAUUUCUGGAUCAAUGAUCCGUACCUCAAUGUCCGGGCGCGCAGCUAGAGCGACCUGAAGAAAUUCAGGUUGGGUUUGAGGGGAAAUUAGGUGCGCUU
target DNA (target strand) c 33 NA AGGTTGCCAAGCGCACCTAATTTCCCATTTTAG
target DNA (non target strand) d 33 NA CTAAAATGGGAAATTAGGTGCGCTTGGCAACCT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-08-24
Deposition Author(s): Hirano, H. , Kobayashi, K. , Kurihara, N. , Kusakizako, T. , Nishimasu, H. , Nishizawa, T. , Nureki, O. , Tomita, A. , Yamashita, K.