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7V6W

Crystal structure of heterohexameric sa2yoeb-sa2yefm complex bound to 26bp-dna

PDB DOI: 10.2210/pdb7v6w/pdb

Classification: DNA BINDING PROTEIN/ANTITOXIN/DNA
Organism(s): Bovine Papillomavirus Type 1 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2021-08-20
Deposition Author(s): Khan, M.H. , Xue, L. , Yue, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.55 Å

Literature

Crystal structure of heterohexameric sa2yoeb-sa2yefm complex bound to 26bp-dna

Khan, M.H. , Xue, L. , Yue, J.

Primary Citation of Related Structures: 7V6W


Proteins
Molecule Chains Sequence Length Organism Sequence
Putative mRNA interferase YoeB F 89 Bovine Papillomavirus Type 1 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) HMSNYTVKIKNSAKSDLKKIKHSYLKKSFLEIVETLKNDPYKITQSFEKLEPKYLERYSRRINHQHRVVYTVDDRNKEVLILSAWSHYD
Putative mRNA interferase YoeB E 89 Bovine Papillomavirus Type 1 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) HMSNYTVKIKNSAKSDLKKIKHSYLKKSFLEIVETLKNDPYKITQSFEKLEPKYLERYSRRINHQHRVVYTVDDRNKEVLILSAWSHYD
Putative mRNA interferase YoeB M 89 Bovine Papillomavirus Type 1 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) HMSNYTVKIKNSAKSDLKKIKHSYLKKSFLEIVETLKNDPYKITQSFEKLEPKYLERYSRRINHQHRVVYTVDDRNKEVLILSAWSHYD
Putative mRNA interferase YoeB N 89 Bovine Papillomavirus Type 1 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) HMSNYTVKIKNSAKSDLKKIKHSYLKKSFLEIVETLKNDPYKITQSFEKLEPKYLERYSRRINHQHRVVYTVDDRNKEVLILSAWSHYD
Antitoxin B 85 Bovine Papillomavirus Type 1 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MIITSPTEARKDFYQLLKNVNNNHEPIYISGNNAENNAVIIGLEDWKSIQETIYLESTGTMDKVREREKDNSGTTNIDDIDWDNL
Antitoxin C 85 Bovine Papillomavirus Type 1 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MIITSPTEARKDFYQLLKNVNNNHEPIYISGNNAENNAVIIGLEDWKSIQETIYLESTGTMDKVREREKDNSGTTNIDDIDWDNL
Antitoxin A 85 Bovine Papillomavirus Type 1 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MIITSPTEARKDFYQLLKNVNNNHEPIYISGNNAENNAVIIGLEDWKSIQETIYLESTGTMDKVREREKDNSGTTNIDDIDWDNL
Antitoxin L 85 Bovine Papillomavirus Type 1 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MIITSPTEARKDFYQLLKNVNNNHEPIYISGNNAENNAVIIGLEDWKSIQETIYLESTGTMDKVREREKDNSGTTNIDDIDWDNL
Antitoxin I 85 Bovine Papillomavirus Type 1 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MIITSPTEARKDFYQLLKNVNNNHEPIYISGNNAENNAVIIGLEDWKSIQETIYLESTGTMDKVREREKDNSGTTNIDDIDWDNL
Antitoxin K 85 Bovine Papillomavirus Type 1 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MIITSPTEARKDFYQLLKNVNNNHEPIYISGNNAENNAVIIGLEDWKSIQETIYLESTGTMDKVREREKDNSGTTNIDDIDWDNL
Antitoxin D 85 Bovine Papillomavirus Type 1 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MIITSPTEARKDFYQLLKNVNNNHEPIYISGNNAENNAVIIGLEDWKSIQETIYLESTGTMDKVREREKDNSGTTNIDDIDWDNL
Antitoxin J 85 Bovine Papillomavirus Type 1 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MIITSPTEARKDFYQLLKNVNNNHEPIYISGNNAENNAVIIGLEDWKSIQETIYLESTGTMDKVREREKDNSGTTNIDDIDWDNL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (26-MER) g 26 NA TTGACGTACTCAAGTGCGTACGCTAT
DNA (26-MER) o 26 NA TTGACGTACTCAAGTGCGTACGCTAT
DNA (25-MER) h 26 NA ATAGCGTACGCACTTGAGTACGTCAA
DNA (25-MER) p 26 NA ATAGCGTACGCACTTGAGTACGTCAA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-08-20
Deposition Author(s): Khan, M.H. , Xue, L. , Yue, J.