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FASTA Sequence PDB Format mmCIF Format
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7V4T

Cryo-em structure of alphavirus m1

PDB DOI: 10.2210/pdb7v4t/pdb

Classification: VIRUS
Organism(s): Alphavirus M1

Deposited: 2021-08-15
Deposition Author(s): Gao, Y. , Jia, X. , Zhang, Q.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.04 Å

7v4t
Literature

Cryo-em structure of alphavirus m1

Gao, Y. , Jia, X. , Zhang, Q.

Primary Citation of Related Structures: 7V4T


Proteins
Molecule Chains Sequence Length Organism Sequence
E1 glycoprotein A 438 Alphavirus M1 YEHTATIPNVVGFPYKAHIERNGFSPMTLQLEVLGTSLEPTLNLEYITCEYKTVVPSPYIKCCGTSECRSMERPDYQCQVYTGVYPFMWGGAYCFCDTENTQLSEAYVDRSDVCKHDHAAAYKAHTAAMKATIRISYGNLNQTTTAFVNGEHTVTVGGSRFTFGPISTAWTPFDNKIVVYKNDVYNLDFPPYGSGQPGRFGDIQSRTVESKDLYANTALKLSRPSSGTVHVPYTQTPSGFKYWIKERGTSLNDKAPFGCVIKTNPVRAENCAVGNIPVSMDIPDSAFTRVIDAPAVTNLECQVAVCTHSSDFGGIATLTFKTDKPGKCAVHSHSNVATIQEAAVDIKTDGKITLHFSTASASPAFKVSVCSAKTTCMAACEPPKDHIVPYGASHNNQVFPDMSGTAMTWVQRVAGGFGGLTLAAVAVLILVTCVTMRR
E1 glycoprotein E 438 Alphavirus M1 YEHTATIPNVVGFPYKAHIERNGFSPMTLQLEVLGTSLEPTLNLEYITCEYKTVVPSPYIKCCGTSECRSMERPDYQCQVYTGVYPFMWGGAYCFCDTENTQLSEAYVDRSDVCKHDHAAAYKAHTAAMKATIRISYGNLNQTTTAFVNGEHTVTVGGSRFTFGPISTAWTPFDNKIVVYKNDVYNLDFPPYGSGQPGRFGDIQSRTVESKDLYANTALKLSRPSSGTVHVPYTQTPSGFKYWIKERGTSLNDKAPFGCVIKTNPVRAENCAVGNIPVSMDIPDSAFTRVIDAPAVTNLECQVAVCTHSSDFGGIATLTFKTDKPGKCAVHSHSNVATIQEAAVDIKTDGKITLHFSTASASPAFKVSVCSAKTTCMAACEPPKDHIVPYGASHNNQVFPDMSGTAMTWVQRVAGGFGGLTLAAVAVLILVTCVTMRR
E1 glycoprotein I 438 Alphavirus M1 YEHTATIPNVVGFPYKAHIERNGFSPMTLQLEVLGTSLEPTLNLEYITCEYKTVVPSPYIKCCGTSECRSMERPDYQCQVYTGVYPFMWGGAYCFCDTENTQLSEAYVDRSDVCKHDHAAAYKAHTAAMKATIRISYGNLNQTTTAFVNGEHTVTVGGSRFTFGPISTAWTPFDNKIVVYKNDVYNLDFPPYGSGQPGRFGDIQSRTVESKDLYANTALKLSRPSSGTVHVPYTQTPSGFKYWIKERGTSLNDKAPFGCVIKTNPVRAENCAVGNIPVSMDIPDSAFTRVIDAPAVTNLECQVAVCTHSSDFGGIATLTFKTDKPGKCAVHSHSNVATIQEAAVDIKTDGKITLHFSTASASPAFKVSVCSAKTTCMAACEPPKDHIVPYGASHNNQVFPDMSGTAMTWVQRVAGGFGGLTLAAVAVLILVTCVTMRR
E1 glycoprotein M 438 Alphavirus M1 YEHTATIPNVVGFPYKAHIERNGFSPMTLQLEVLGTSLEPTLNLEYITCEYKTVVPSPYIKCCGTSECRSMERPDYQCQVYTGVYPFMWGGAYCFCDTENTQLSEAYVDRSDVCKHDHAAAYKAHTAAMKATIRISYGNLNQTTTAFVNGEHTVTVGGSRFTFGPISTAWTPFDNKIVVYKNDVYNLDFPPYGSGQPGRFGDIQSRTVESKDLYANTALKLSRPSSGTVHVPYTQTPSGFKYWIKERGTSLNDKAPFGCVIKTNPVRAENCAVGNIPVSMDIPDSAFTRVIDAPAVTNLECQVAVCTHSSDFGGIATLTFKTDKPGKCAVHSHSNVATIQEAAVDIKTDGKITLHFSTASASPAFKVSVCSAKTTCMAACEPPKDHIVPYGASHNNQVFPDMSGTAMTWVQRVAGGFGGLTLAAVAVLILVTCVTMRR
E2 glycoprotein B 422 Alphavirus M1 SVTKHFNVYKATKPYLAYCADCGDGQFCYSPVAIEKIRDEASDGMIKIQVAAQIGINKGGTHEHNKIRYIAGHDMKEANRDSLQVHTSGVCAIRGTMGHFIVAYCPPGGELKVQFQDAESHTQACKVQYKHAPAPVGREKFTVRPHFGIEVPCTTYQLTTAPTEEEIDMHTPPDIPDITLLSQRSGNVKITAGGKTIRYNCTCGSGNVGTTSSDKTINSCKIAQCHAAVTNHDKWQYTSSFVPRADQLSRKGKVHVPFPLTNSTCRVPLARAPGVTYGKRELTVKLHPDHPTLLTYRSLGADPRPYEEWIDRYVERTIPVTEDGIEYRWGNNPPVRLWAQLTTEGKPHGWPHEIILYYYGLYPAATIVAVSAACLAVVLSLLASCYMFATARRKCLTPYALTPGAVVPVTLGVLCCAPRAHA
E2 glycoprotein F 422 Alphavirus M1 SVTKHFNVYKATKPYLAYCADCGDGQFCYSPVAIEKIRDEASDGMIKIQVAAQIGINKGGTHEHNKIRYIAGHDMKEANRDSLQVHTSGVCAIRGTMGHFIVAYCPPGGELKVQFQDAESHTQACKVQYKHAPAPVGREKFTVRPHFGIEVPCTTYQLTTAPTEEEIDMHTPPDIPDITLLSQRSGNVKITAGGKTIRYNCTCGSGNVGTTSSDKTINSCKIAQCHAAVTNHDKWQYTSSFVPRADQLSRKGKVHVPFPLTNSTCRVPLARAPGVTYGKRELTVKLHPDHPTLLTYRSLGADPRPYEEWIDRYVERTIPVTEDGIEYRWGNNPPVRLWAQLTTEGKPHGWPHEIILYYYGLYPAATIVAVSAACLAVVLSLLASCYMFATARRKCLTPYALTPGAVVPVTLGVLCCAPRAHA
E2 glycoprotein J 422 Alphavirus M1 SVTKHFNVYKATKPYLAYCADCGDGQFCYSPVAIEKIRDEASDGMIKIQVAAQIGINKGGTHEHNKIRYIAGHDMKEANRDSLQVHTSGVCAIRGTMGHFIVAYCPPGGELKVQFQDAESHTQACKVQYKHAPAPVGREKFTVRPHFGIEVPCTTYQLTTAPTEEEIDMHTPPDIPDITLLSQRSGNVKITAGGKTIRYNCTCGSGNVGTTSSDKTINSCKIAQCHAAVTNHDKWQYTSSFVPRADQLSRKGKVHVPFPLTNSTCRVPLARAPGVTYGKRELTVKLHPDHPTLLTYRSLGADPRPYEEWIDRYVERTIPVTEDGIEYRWGNNPPVRLWAQLTTEGKPHGWPHEIILYYYGLYPAATIVAVSAACLAVVLSLLASCYMFATARRKCLTPYALTPGAVVPVTLGVLCCAPRAHA
E2 glycoprotein N 422 Alphavirus M1 SVTKHFNVYKATKPYLAYCADCGDGQFCYSPVAIEKIRDEASDGMIKIQVAAQIGINKGGTHEHNKIRYIAGHDMKEANRDSLQVHTSGVCAIRGTMGHFIVAYCPPGGELKVQFQDAESHTQACKVQYKHAPAPVGREKFTVRPHFGIEVPCTTYQLTTAPTEEEIDMHTPPDIPDITLLSQRSGNVKITAGGKTIRYNCTCGSGNVGTTSSDKTINSCKIAQCHAAVTNHDKWQYTSSFVPRADQLSRKGKVHVPFPLTNSTCRVPLARAPGVTYGKRELTVKLHPDHPTLLTYRSLGADPRPYEEWIDRYVERTIPVTEDGIEYRWGNNPPVRLWAQLTTEGKPHGWPHEIILYYYGLYPAATIVAVSAACLAVVLSLLASCYMFATARRKCLTPYALTPGAVVPVTLGVLCCAPRAHA
Capsid protein C 267 Alphavirus M1 MNYIPTQTFYGRRWRPRPAFRPWRVPMQPAPPMIPELQTPIVQAQQMQQLISAVSALTTKQNGKAPKKPKKKPQKAKAKKNEQQKKNENKKPPPKQKNPAKKKKPGKRERMCMKIENDCIFEVKLDGKVTGYACLVGDKVMKPAHVKGVIDNPDLAKLTYKKSSKYDLECAQIPVHMKSDASKYTHEKPEGHYNWHHGAVQYSGGRFTIPTGAGKPGDSGRPIFDNKGRVVAIVLGGANEGARTALSVVTWTKDMVTRYTPEGTEEW
Capsid protein G 267 Alphavirus M1 MNYIPTQTFYGRRWRPRPAFRPWRVPMQPAPPMIPELQTPIVQAQQMQQLISAVSALTTKQNGKAPKKPKKKPQKAKAKKNEQQKKNENKKPPPKQKNPAKKKKPGKRERMCMKIENDCIFEVKLDGKVTGYACLVGDKVMKPAHVKGVIDNPDLAKLTYKKSSKYDLECAQIPVHMKSDASKYTHEKPEGHYNWHHGAVQYSGGRFTIPTGAGKPGDSGRPIFDNKGRVVAIVLGGANEGARTALSVVTWTKDMVTRYTPEGTEEW
Capsid protein K 267 Alphavirus M1 MNYIPTQTFYGRRWRPRPAFRPWRVPMQPAPPMIPELQTPIVQAQQMQQLISAVSALTTKQNGKAPKKPKKKPQKAKAKKNEQQKKNENKKPPPKQKNPAKKKKPGKRERMCMKIENDCIFEVKLDGKVTGYACLVGDKVMKPAHVKGVIDNPDLAKLTYKKSSKYDLECAQIPVHMKSDASKYTHEKPEGHYNWHHGAVQYSGGRFTIPTGAGKPGDSGRPIFDNKGRVVAIVLGGANEGARTALSVVTWTKDMVTRYTPEGTEEW
Capsid protein O 267 Alphavirus M1 MNYIPTQTFYGRRWRPRPAFRPWRVPMQPAPPMIPELQTPIVQAQQMQQLISAVSALTTKQNGKAPKKPKKKPQKAKAKKNEQQKKNENKKPPPKQKNPAKKKKPGKRERMCMKIENDCIFEVKLDGKVTGYACLVGDKVMKPAHVKGVIDNPDLAKLTYKKSSKYDLECAQIPVHMKSDASKYTHEKPEGHYNWHHGAVQYSGGRFTIPTGAGKPGDSGRPIFDNKGRVVAIVLGGANEGARTALSVVTWTKDMVTRYTPEGTEEW
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-08-15
Deposition Author(s): Gao, Y. , Jia, X. , Zhang, Q.