PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7V4G

Crystal structure of human alkbh5 in complex with m6a-containing ssrna

PDB DOI: 10.2210/pdb7v4g/pdb

Classification: OXIDOREDUCTASE/RNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2021-08-13
Deposition Author(s): Aik, W.S. , Kaur, S. , Mcdonough, M.A. , Schofield, C.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.1 Å

Literature

Crystal structure of human alkbh5 in complex with m6a-containing ssrna

Aik, W.S. , Kaur, S. , Mcdonough, M.A. , Schofield, C.J.

Primary Citation of Related Structures: 7V4G


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*GP*GP*(6MZ)P*C)-3') d 8 NA UGGACUGC
RNA (5'-R(P*GP*GP*(6MZ)P*C)-3') e 8 NA UGGACUGC
RNA (5'-R(P*GP*GP*(6MZ)P*C)-3') f 8 NA UGGACUGC

Proteins
Molecule Chains Sequence Length Organism Sequence
RNA demethylase ALKBH5 A 220 Homo Sapiens , Synthetic Construct SQQLQKEEEARKVKSGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRL
RNA demethylase ALKBH5 B 220 Homo Sapiens , Synthetic Construct SQQLQKEEEARKVKSGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRL
RNA demethylase ALKBH5 C 220 Homo Sapiens , Synthetic Construct SQQLQKEEEARKVKSGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRL
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-08-13
Deposition Author(s): Aik, W.S. , Kaur, S. , Mcdonough, M.A. , Schofield, C.J.