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7UV6
Isoreticular, interpenetrating co-crystal of replication initiator protein repe54 and scaffold duplex (21mer) containing the cognate repe54 sequence and an insert duplex (10mer) with guest tamra-labelled thymine and g-c rich sequence.
PDB DOI: 10.2210/pdb7uv6/pdb
Classification: DNA BINDING PROTEIN/DNA Organism(s): Escherichia Coli K-12 , Synthetic Construct
Deposited: 2022-04-29 Deposition Author(s): Orun, A.R. , Snow, C.D.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.72 Å
Isoreticular, interpenetrating co-crystal of replication initiator protein repe54 and scaffold duplex (21mer) containing the cognate repe54 sequence and an insert duplex (10mer) with guest tamra-labelled thymine and g-c rich sequence.
Primary Citation of Related Structures: 7UV6
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*AP*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*A)-3') | a | 21 | NA | ACCTGTGACAAATTGCCCTCA |
| DNA (5'-D(*TP*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*G)-3') | b | 21 | NA | TCTGAGGGCAATTTGTCACAG |
| DNA (5'-D(*GP*AP*CP*GP*GP*CP*CP*CP*GP*G)-3') | e | 10 | NA | GACGGCCCGG |
| DNA (5'-D(*GP*T(TAMRA)P*CP*CP*GP*GP*GP*CP*CP*G)-3') | f | 10 | NA | GTCCGGGCCG |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Replication initiation protein | C | 263 | Escherichia Coli K-12 , Synthetic Construct | MRGSHHHHHHGSMAETAVINHKKRKNSPRIVQSNDLTEAAYSLSRDQKRMLYLFVDQIRKSDGTLQEHDGICEIHVAKYAEIFGLTSAEASKDIRQALKSFAGKEVVFYRPEEDAGDEKGYESFPWFIKPAHSPSRGLYSVHINPYLIPFFIGLQNRFTQFRLSETKEITNPYAMRLYESLCQYRKPDGSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRTPMRLSYIEKKKGRQTTHIVFSFRDITSMTTG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2022-04-29 Deposition Author(s): Orun, A.R. , Snow, C.D.