Cryo-em structure of shiv-elicited, fp-directed rhesus fab rm6561.dh1021.14 in complex with stabilized hiv-1 env ce1176 ds-sosip.664
PDB DOI: 10.2210/pdb7ur6/pdb
Classification: VIRAL PROTEIN/Immune System Organism(s): Human Immunodeficiency Virus 1 , Macaca Mulatta
Deposited: 2022-04-21 Deposition Author(s): Gorman, J. , Kwong, P.D.
Cryo-em structure of shiv-elicited, fp-directed rhesus fab rm6561.dh1021.14 in complex with stabilized hiv-1 env ce1176 ds-sosip.664
Primary Citation of Related Structures: 7UR6
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
gp120 | G | 477 | Human Immunodeficiency Virus 1 , Macaca Mulatta | GPAENLWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTDPNPQEMVLENVTENFNMWKNDMVDQMHEDVISLWDQSLKPCVKLTPLCVTLNCTNTTVSNGSSNSNANFEEMKNCSFNATTEIKDKKKNEYALFYKLDIVPLNNSSGKYRLINCNTSACTQICPKVTFEPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIIRSENLTNNAKTIIVHLNESVGIVCTRPSNMTRKSIRIGPGQTFYALGDIIGDIRQPHCNISKQNWNRTLQQVGRKLAEHFPNRNITFNHSSGGDLEITTHSFNCRGEFFYCNTSGLFNGTYHPNGTYNETAVNSSDTITLQCRIKQIINMWQEVGRCMYAPPIAGNITCNSNITGLLLTRDGGINQTGEEIFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTKCKRRVVERRRRRR |
gp120 | A | 477 | Human Immunodeficiency Virus 1 , Macaca Mulatta | GPAENLWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTDPNPQEMVLENVTENFNMWKNDMVDQMHEDVISLWDQSLKPCVKLTPLCVTLNCTNTTVSNGSSNSNANFEEMKNCSFNATTEIKDKKKNEYALFYKLDIVPLNNSSGKYRLINCNTSACTQICPKVTFEPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIIRSENLTNNAKTIIVHLNESVGIVCTRPSNMTRKSIRIGPGQTFYALGDIIGDIRQPHCNISKQNWNRTLQQVGRKLAEHFPNRNITFNHSSGGDLEITTHSFNCRGEFFYCNTSGLFNGTYHPNGTYNETAVNSSDTITLQCRIKQIINMWQEVGRCMYAPPIAGNITCNSNITGLLLTRDGGINQTGEEIFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTKCKRRVVERRRRRR |
gp120 | F | 477 | Human Immunodeficiency Virus 1 , Macaca Mulatta | GPAENLWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTDPNPQEMVLENVTENFNMWKNDMVDQMHEDVISLWDQSLKPCVKLTPLCVTLNCTNTTVSNGSSNSNANFEEMKNCSFNATTEIKDKKKNEYALFYKLDIVPLNNSSGKYRLINCNTSACTQICPKVTFEPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIIRSENLTNNAKTIIVHLNESVGIVCTRPSNMTRKSIRIGPGQTFYALGDIIGDIRQPHCNISKQNWNRTLQQVGRKLAEHFPNRNITFNHSSGGDLEITTHSFNCRGEFFYCNTSGLFNGTYHPNGTYNETAVNSSDTITLQCRIKQIINMWQEVGRCMYAPPIAGNITCNSNITGLLLTRDGGINQTGEEIFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTKCKRRVVERRRRRR |
gp41 | B | 153 | Human Immunodeficiency Virus 1 , Macaca Mulatta | AVGIGAVFLGFLGAAGSTMGAASNTLTVQARQLLSGIVQQQSNLLRAPEAQQHMLQLGVWGFKQLQARVLAIERYLEVQQLLGIWGCSGKLICCTNVPWNSTWSNRTQEDIWNNMTWMEWEREIGNYTHTIYSLLEESQFQQEINEKDLLALD |
gp41 | C | 153 | Human Immunodeficiency Virus 1 , Macaca Mulatta | AVGIGAVFLGFLGAAGSTMGAASNTLTVQARQLLSGIVQQQSNLLRAPEAQQHMLQLGVWGFKQLQARVLAIERYLEVQQLLGIWGCSGKLICCTNVPWNSTWSNRTQEDIWNNMTWMEWEREIGNYTHTIYSLLEESQFQQEINEKDLLALD |
gp41 | I | 153 | Human Immunodeficiency Virus 1 , Macaca Mulatta | AVGIGAVFLGFLGAAGSTMGAASNTLTVQARQLLSGIVQQQSNLLRAPEAQQHMLQLGVWGFKQLQARVLAIERYLEVQQLLGIWGCSGKLICCTNVPWNSTWSNRTQEDIWNNMTWMEWEREIGNYTHTIYSLLEESQFQQEINEKDLLALD |
Heavy Chain | H | 130 | Human Immunodeficiency Virus 1 , Macaca Mulatta | QVTLKESGPALVKPTQTLTLTCTFSGFSMSNFGSGIYWIRQPPGKALEWLAGIYWTDSKYYNLSLKTRLTISKDTSKSQVILIMTNMDPVDTATYYCADIRGRYYYSNGFLFDVVGVESWGQGVVVTVSS |
Heavy Chain | D | 130 | Human Immunodeficiency Virus 1 , Macaca Mulatta | QVTLKESGPALVKPTQTLTLTCTFSGFSMSNFGSGIYWIRQPPGKALEWLAGIYWTDSKYYNLSLKTRLTISKDTSKSQVILIMTNMDPVDTATYYCADIRGRYYYSNGFLFDVVGVESWGQGVVVTVSS |
Heavy Chain | J | 130 | Human Immunodeficiency Virus 1 , Macaca Mulatta | QVTLKESGPALVKPTQTLTLTCTFSGFSMSNFGSGIYWIRQPPGKALEWLAGIYWTDSKYYNLSLKTRLTISKDTSKSQVILIMTNMDPVDTATYYCADIRGRYYYSNGFLFDVVGVESWGQGVVVTVSS |
Light Chain | L | 110 | Human Immunodeficiency Virus 1 , Macaca Mulatta | QSVLTQPPSASEAARKTVTISCSGSRSNIGSNSVSWYKQVPGTAPKLLIKYNDQRPSGVSDRFSGSKSGTSASLAISGLQTEDEADYYCATWDDSLNGYIFGVGTRLIVL |
Light Chain | E | 110 | Human Immunodeficiency Virus 1 , Macaca Mulatta | QSVLTQPPSASEAARKTVTISCSGSRSNIGSNSVSWYKQVPGTAPKLLIKYNDQRPSGVSDRFSGSKSGTSASLAISGLQTEDEADYYCATWDDSLNGYIFGVGTRLIVL |
Light Chain | K | 110 | Human Immunodeficiency Virus 1 , Macaca Mulatta | QSVLTQPPSASEAARKTVTISCSGSRSNIGSNSVSWYKQVPGTAPKLLIKYNDQRPSGVSDRFSGSKSGTSASLAISGLQTEDEADYYCATWDDSLNGYIFGVGTRLIVL |
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-04-21 Deposition Author(s): Gorman, J. , Kwong, P.D.