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7UL1

Crystal structure of sars-cov-2 rbd in complex with the neutralizing ighv3-53-encoded antibody eh3 isolated from a nonvaccinated pediatric patient

PDB DOI: 10.2210/pdb7ul1/pdb

Classification: VIRAL PROTEIN/Immune System
Organism(s): Salmonella Enterica , [Ruminococcus] Gnavus Atcc 29149

Deposited: 2022-04-03
Deposition Author(s): Chen, Y. , Pazgier, M. , Tolbert, W.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.65 Å

Literature

Crystal structure of sars-cov-2 rbd in complex with the neutralizing ighv3-53-encoded antibody eh3 isolated from a nonvaccinated pediatric patient

Chen, Y. , Pazgier, M. , Tolbert, W.D.

Primary Citation of Related Structures: 7UL1


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 210 Salmonella Enterica , [Ruminococcus] Gnavus Atcc 29149 FPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKC
Heavy chain of EH3 H 221 Salmonella Enterica , [Ruminococcus] Gnavus Atcc 29149 EVQLVESGGGLVQPGGSLRLSCAASGITVSSNYMTWVRQAPGKGLEWVSVIYSGGSTFYADSVRGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLEMAGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
Light chain of EH3 L 214 Salmonella Enterica , [Ruminococcus] Gnavus Atcc 29149 EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDSAVYYCQQYGSSYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-04-03
Deposition Author(s): Chen, Y. , Pazgier, M. , Tolbert, W.D.