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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7U39

Structure of the apo form of streptomyces venezuelae glgx, the glycogen debranching enzyme

PDB DOI: 10.2210/pdb7u39/pdb

Classification: HYDROLASE
Organism(s): Streptomyces Venezuelae

Deposited: 2022-02-26
Deposition Author(s): Schumacher, M.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.51 Å

7u39
Literature

Structure of the apo form of streptomyces venezuelae glgx, the glycogen debranching enzyme

Schumacher, M.A.

Primary Citation of Related Structures: 7U39


Proteins
Molecule Chains Sequence Length Organism Sequence
Glycogen debranching enzyme GlgX A 709 Streptomyces Venezuelae GSHMQVWPGQAYPLGATYDGAGTNFAVFSEAAHRIELCLLHDDGSETAVELRETDAFVRHAYLPGVMPGQRYGFRVHGPYAPERGLRCNAAKLLLDPYARAVSGRVRWGEAVYGYPFGRPDARNDLDSAPDTMTSVVVNPYFDWGDDRRPRTEYHHTVIYEAHVKGLTMLHPDLPEELRGTYAGLAHPSVIGHLRELGVTALELMPVHQFVNDHRLVDAGLSNYWGYNTIGFFAPHNAYASWGDRGQQVLEFKSAVRALHQAGIEVILDVVYNHTAEGNHLGPTLSMRGLDNPSYYRLADDPRYYMDTTGTGNSLLMRSPHVLQLIMDSLRYWVTEMHVDGFRFDLAATLARQFHEVDRLSSFFDLVQQDPVVSQVKLIAEPWDVGEGGYQVGNFPPLWTEWNGKYRDCVRDLWRGEPRTLAEFASRLTGSSDLYQDDGRRPLASVNFVTCHDGFTLRDLVSYNEKRNEANGEGNRDGENYNRSWNCGEEGETEDVGITELRARQMRNFLATLMLSQGVPMLSHGDEFGRTQGGNNNAYCQDNEVSWVRWPKENSEAEATLLRFTRSMVRLRREHPVFRRRRFFHGRPVEGTHDELTDIAWFTPEGEEMTSRDWQAAHAQALTVFLNGNAISEPGTQGERIADDSFLLMFNASAKELEFVVPDSHGRYWRMVVDTSDPEGMPPQQGPELAGGERVTLAPLSLTVLRRPA
Glycogen debranching enzyme GlgX B 709 Streptomyces Venezuelae GSHMQVWPGQAYPLGATYDGAGTNFAVFSEAAHRIELCLLHDDGSETAVELRETDAFVRHAYLPGVMPGQRYGFRVHGPYAPERGLRCNAAKLLLDPYARAVSGRVRWGEAVYGYPFGRPDARNDLDSAPDTMTSVVVNPYFDWGDDRRPRTEYHHTVIYEAHVKGLTMLHPDLPEELRGTYAGLAHPSVIGHLRELGVTALELMPVHQFVNDHRLVDAGLSNYWGYNTIGFFAPHNAYASWGDRGQQVLEFKSAVRALHQAGIEVILDVVYNHTAEGNHLGPTLSMRGLDNPSYYRLADDPRYYMDTTGTGNSLLMRSPHVLQLIMDSLRYWVTEMHVDGFRFDLAATLARQFHEVDRLSSFFDLVQQDPVVSQVKLIAEPWDVGEGGYQVGNFPPLWTEWNGKYRDCVRDLWRGEPRTLAEFASRLTGSSDLYQDDGRRPLASVNFVTCHDGFTLRDLVSYNEKRNEANGEGNRDGENYNRSWNCGEEGETEDVGITELRARQMRNFLATLMLSQGVPMLSHGDEFGRTQGGNNNAYCQDNEVSWVRWPKENSEAEATLLRFTRSMVRLRREHPVFRRRRFFHGRPVEGTHDELTDIAWFTPEGEEMTSRDWQAAHAQALTVFLNGNAISEPGTQGERIADDSFLLMFNASAKELEFVVPDSHGRYWRMVVDTSDPEGMPPQQGPELAGGERVTLAPLSLTVLRRPA
Glycogen debranching enzyme GlgX C 709 Streptomyces Venezuelae GSHMQVWPGQAYPLGATYDGAGTNFAVFSEAAHRIELCLLHDDGSETAVELRETDAFVRHAYLPGVMPGQRYGFRVHGPYAPERGLRCNAAKLLLDPYARAVSGRVRWGEAVYGYPFGRPDARNDLDSAPDTMTSVVVNPYFDWGDDRRPRTEYHHTVIYEAHVKGLTMLHPDLPEELRGTYAGLAHPSVIGHLRELGVTALELMPVHQFVNDHRLVDAGLSNYWGYNTIGFFAPHNAYASWGDRGQQVLEFKSAVRALHQAGIEVILDVVYNHTAEGNHLGPTLSMRGLDNPSYYRLADDPRYYMDTTGTGNSLLMRSPHVLQLIMDSLRYWVTEMHVDGFRFDLAATLARQFHEVDRLSSFFDLVQQDPVVSQVKLIAEPWDVGEGGYQVGNFPPLWTEWNGKYRDCVRDLWRGEPRTLAEFASRLTGSSDLYQDDGRRPLASVNFVTCHDGFTLRDLVSYNEKRNEANGEGNRDGENYNRSWNCGEEGETEDVGITELRARQMRNFLATLMLSQGVPMLSHGDEFGRTQGGNNNAYCQDNEVSWVRWPKENSEAEATLLRFTRSMVRLRREHPVFRRRRFFHGRPVEGTHDELTDIAWFTPEGEEMTSRDWQAAHAQALTVFLNGNAISEPGTQGERIADDSFLLMFNASAKELEFVVPDSHGRYWRMVVDTSDPEGMPPQQGPELAGGERVTLAPLSLTVLRRPA
Glycogen debranching enzyme GlgX D 709 Streptomyces Venezuelae GSHMQVWPGQAYPLGATYDGAGTNFAVFSEAAHRIELCLLHDDGSETAVELRETDAFVRHAYLPGVMPGQRYGFRVHGPYAPERGLRCNAAKLLLDPYARAVSGRVRWGEAVYGYPFGRPDARNDLDSAPDTMTSVVVNPYFDWGDDRRPRTEYHHTVIYEAHVKGLTMLHPDLPEELRGTYAGLAHPSVIGHLRELGVTALELMPVHQFVNDHRLVDAGLSNYWGYNTIGFFAPHNAYASWGDRGQQVLEFKSAVRALHQAGIEVILDVVYNHTAEGNHLGPTLSMRGLDNPSYYRLADDPRYYMDTTGTGNSLLMRSPHVLQLIMDSLRYWVTEMHVDGFRFDLAATLARQFHEVDRLSSFFDLVQQDPVVSQVKLIAEPWDVGEGGYQVGNFPPLWTEWNGKYRDCVRDLWRGEPRTLAEFASRLTGSSDLYQDDGRRPLASVNFVTCHDGFTLRDLVSYNEKRNEANGEGNRDGENYNRSWNCGEEGETEDVGITELRARQMRNFLATLMLSQGVPMLSHGDEFGRTQGGNNNAYCQDNEVSWVRWPKENSEAEATLLRFTRSMVRLRREHPVFRRRRFFHGRPVEGTHDELTDIAWFTPEGEEMTSRDWQAAHAQALTVFLNGNAISEPGTQGERIADDSFLLMFNASAKELEFVVPDSHGRYWRMVVDTSDPEGMPPQQGPELAGGERVTLAPLSLTVLRRPA
Glycogen debranching enzyme GlgX E 709 Streptomyces Venezuelae GSHMQVWPGQAYPLGATYDGAGTNFAVFSEAAHRIELCLLHDDGSETAVELRETDAFVRHAYLPGVMPGQRYGFRVHGPYAPERGLRCNAAKLLLDPYARAVSGRVRWGEAVYGYPFGRPDARNDLDSAPDTMTSVVVNPYFDWGDDRRPRTEYHHTVIYEAHVKGLTMLHPDLPEELRGTYAGLAHPSVIGHLRELGVTALELMPVHQFVNDHRLVDAGLSNYWGYNTIGFFAPHNAYASWGDRGQQVLEFKSAVRALHQAGIEVILDVVYNHTAEGNHLGPTLSMRGLDNPSYYRLADDPRYYMDTTGTGNSLLMRSPHVLQLIMDSLRYWVTEMHVDGFRFDLAATLARQFHEVDRLSSFFDLVQQDPVVSQVKLIAEPWDVGEGGYQVGNFPPLWTEWNGKYRDCVRDLWRGEPRTLAEFASRLTGSSDLYQDDGRRPLASVNFVTCHDGFTLRDLVSYNEKRNEANGEGNRDGENYNRSWNCGEEGETEDVGITELRARQMRNFLATLMLSQGVPMLSHGDEFGRTQGGNNNAYCQDNEVSWVRWPKENSEAEATLLRFTRSMVRLRREHPVFRRRRFFHGRPVEGTHDELTDIAWFTPEGEEMTSRDWQAAHAQALTVFLNGNAISEPGTQGERIADDSFLLMFNASAKELEFVVPDSHGRYWRMVVDTSDPEGMPPQQGPELAGGERVTLAPLSLTVLRRPA
Glycogen debranching enzyme GlgX F 709 Streptomyces Venezuelae GSHMQVWPGQAYPLGATYDGAGTNFAVFSEAAHRIELCLLHDDGSETAVELRETDAFVRHAYLPGVMPGQRYGFRVHGPYAPERGLRCNAAKLLLDPYARAVSGRVRWGEAVYGYPFGRPDARNDLDSAPDTMTSVVVNPYFDWGDDRRPRTEYHHTVIYEAHVKGLTMLHPDLPEELRGTYAGLAHPSVIGHLRELGVTALELMPVHQFVNDHRLVDAGLSNYWGYNTIGFFAPHNAYASWGDRGQQVLEFKSAVRALHQAGIEVILDVVYNHTAEGNHLGPTLSMRGLDNPSYYRLADDPRYYMDTTGTGNSLLMRSPHVLQLIMDSLRYWVTEMHVDGFRFDLAATLARQFHEVDRLSSFFDLVQQDPVVSQVKLIAEPWDVGEGGYQVGNFPPLWTEWNGKYRDCVRDLWRGEPRTLAEFASRLTGSSDLYQDDGRRPLASVNFVTCHDGFTLRDLVSYNEKRNEANGEGNRDGENYNRSWNCGEEGETEDVGITELRARQMRNFLATLMLSQGVPMLSHGDEFGRTQGGNNNAYCQDNEVSWVRWPKENSEAEATLLRFTRSMVRLRREHPVFRRRRFFHGRPVEGTHDELTDIAWFTPEGEEMTSRDWQAAHAQALTVFLNGNAISEPGTQGERIADDSFLLMFNASAKELEFVVPDSHGRYWRMVVDTSDPEGMPPQQGPELAGGERVTLAPLSLTVLRRPA
Glycogen debranching enzyme GlgX G 709 Streptomyces Venezuelae GSHMQVWPGQAYPLGATYDGAGTNFAVFSEAAHRIELCLLHDDGSETAVELRETDAFVRHAYLPGVMPGQRYGFRVHGPYAPERGLRCNAAKLLLDPYARAVSGRVRWGEAVYGYPFGRPDARNDLDSAPDTMTSVVVNPYFDWGDDRRPRTEYHHTVIYEAHVKGLTMLHPDLPEELRGTYAGLAHPSVIGHLRELGVTALELMPVHQFVNDHRLVDAGLSNYWGYNTIGFFAPHNAYASWGDRGQQVLEFKSAVRALHQAGIEVILDVVYNHTAEGNHLGPTLSMRGLDNPSYYRLADDPRYYMDTTGTGNSLLMRSPHVLQLIMDSLRYWVTEMHVDGFRFDLAATLARQFHEVDRLSSFFDLVQQDPVVSQVKLIAEPWDVGEGGYQVGNFPPLWTEWNGKYRDCVRDLWRGEPRTLAEFASRLTGSSDLYQDDGRRPLASVNFVTCHDGFTLRDLVSYNEKRNEANGEGNRDGENYNRSWNCGEEGETEDVGITELRARQMRNFLATLMLSQGVPMLSHGDEFGRTQGGNNNAYCQDNEVSWVRWPKENSEAEATLLRFTRSMVRLRREHPVFRRRRFFHGRPVEGTHDELTDIAWFTPEGEEMTSRDWQAAHAQALTVFLNGNAISEPGTQGERIADDSFLLMFNASAKELEFVVPDSHGRYWRMVVDTSDPEGMPPQQGPELAGGERVTLAPLSLTVLRRPA
Glycogen debranching enzyme GlgX H 709 Streptomyces Venezuelae GSHMQVWPGQAYPLGATYDGAGTNFAVFSEAAHRIELCLLHDDGSETAVELRETDAFVRHAYLPGVMPGQRYGFRVHGPYAPERGLRCNAAKLLLDPYARAVSGRVRWGEAVYGYPFGRPDARNDLDSAPDTMTSVVVNPYFDWGDDRRPRTEYHHTVIYEAHVKGLTMLHPDLPEELRGTYAGLAHPSVIGHLRELGVTALELMPVHQFVNDHRLVDAGLSNYWGYNTIGFFAPHNAYASWGDRGQQVLEFKSAVRALHQAGIEVILDVVYNHTAEGNHLGPTLSMRGLDNPSYYRLADDPRYYMDTTGTGNSLLMRSPHVLQLIMDSLRYWVTEMHVDGFRFDLAATLARQFHEVDRLSSFFDLVQQDPVVSQVKLIAEPWDVGEGGYQVGNFPPLWTEWNGKYRDCVRDLWRGEPRTLAEFASRLTGSSDLYQDDGRRPLASVNFVTCHDGFTLRDLVSYNEKRNEANGEGNRDGENYNRSWNCGEEGETEDVGITELRARQMRNFLATLMLSQGVPMLSHGDEFGRTQGGNNNAYCQDNEVSWVRWPKENSEAEATLLRFTRSMVRLRREHPVFRRRRFFHGRPVEGTHDELTDIAWFTPEGEEMTSRDWQAAHAQALTVFLNGNAISEPGTQGERIADDSFLLMFNASAKELEFVVPDSHGRYWRMVVDTSDPEGMPPQQGPELAGGERVTLAPLSLTVLRRPA
Glycogen debranching enzyme GlgX I 709 Streptomyces Venezuelae GSHMQVWPGQAYPLGATYDGAGTNFAVFSEAAHRIELCLLHDDGSETAVELRETDAFVRHAYLPGVMPGQRYGFRVHGPYAPERGLRCNAAKLLLDPYARAVSGRVRWGEAVYGYPFGRPDARNDLDSAPDTMTSVVVNPYFDWGDDRRPRTEYHHTVIYEAHVKGLTMLHPDLPEELRGTYAGLAHPSVIGHLRELGVTALELMPVHQFVNDHRLVDAGLSNYWGYNTIGFFAPHNAYASWGDRGQQVLEFKSAVRALHQAGIEVILDVVYNHTAEGNHLGPTLSMRGLDNPSYYRLADDPRYYMDTTGTGNSLLMRSPHVLQLIMDSLRYWVTEMHVDGFRFDLAATLARQFHEVDRLSSFFDLVQQDPVVSQVKLIAEPWDVGEGGYQVGNFPPLWTEWNGKYRDCVRDLWRGEPRTLAEFASRLTGSSDLYQDDGRRPLASVNFVTCHDGFTLRDLVSYNEKRNEANGEGNRDGENYNRSWNCGEEGETEDVGITELRARQMRNFLATLMLSQGVPMLSHGDEFGRTQGGNNNAYCQDNEVSWVRWPKENSEAEATLLRFTRSMVRLRREHPVFRRRRFFHGRPVEGTHDELTDIAWFTPEGEEMTSRDWQAAHAQALTVFLNGNAISEPGTQGERIADDSFLLMFNASAKELEFVVPDSHGRYWRMVVDTSDPEGMPPQQGPELAGGERVTLAPLSLTVLRRPA
Glycogen debranching enzyme GlgX J 709 Streptomyces Venezuelae GSHMQVWPGQAYPLGATYDGAGTNFAVFSEAAHRIELCLLHDDGSETAVELRETDAFVRHAYLPGVMPGQRYGFRVHGPYAPERGLRCNAAKLLLDPYARAVSGRVRWGEAVYGYPFGRPDARNDLDSAPDTMTSVVVNPYFDWGDDRRPRTEYHHTVIYEAHVKGLTMLHPDLPEELRGTYAGLAHPSVIGHLRELGVTALELMPVHQFVNDHRLVDAGLSNYWGYNTIGFFAPHNAYASWGDRGQQVLEFKSAVRALHQAGIEVILDVVYNHTAEGNHLGPTLSMRGLDNPSYYRLADDPRYYMDTTGTGNSLLMRSPHVLQLIMDSLRYWVTEMHVDGFRFDLAATLARQFHEVDRLSSFFDLVQQDPVVSQVKLIAEPWDVGEGGYQVGNFPPLWTEWNGKYRDCVRDLWRGEPRTLAEFASRLTGSSDLYQDDGRRPLASVNFVTCHDGFTLRDLVSYNEKRNEANGEGNRDGENYNRSWNCGEEGETEDVGITELRARQMRNFLATLMLSQGVPMLSHGDEFGRTQGGNNNAYCQDNEVSWVRWPKENSEAEATLLRFTRSMVRLRREHPVFRRRRFFHGRPVEGTHDELTDIAWFTPEGEEMTSRDWQAAHAQALTVFLNGNAISEPGTQGERIADDSFLLMFNASAKELEFVVPDSHGRYWRMVVDTSDPEGMPPQQGPELAGGERVTLAPLSLTVLRRPA
Glycogen debranching enzyme GlgX K 709 Streptomyces Venezuelae GSHMQVWPGQAYPLGATYDGAGTNFAVFSEAAHRIELCLLHDDGSETAVELRETDAFVRHAYLPGVMPGQRYGFRVHGPYAPERGLRCNAAKLLLDPYARAVSGRVRWGEAVYGYPFGRPDARNDLDSAPDTMTSVVVNPYFDWGDDRRPRTEYHHTVIYEAHVKGLTMLHPDLPEELRGTYAGLAHPSVIGHLRELGVTALELMPVHQFVNDHRLVDAGLSNYWGYNTIGFFAPHNAYASWGDRGQQVLEFKSAVRALHQAGIEVILDVVYNHTAEGNHLGPTLSMRGLDNPSYYRLADDPRYYMDTTGTGNSLLMRSPHVLQLIMDSLRYWVTEMHVDGFRFDLAATLARQFHEVDRLSSFFDLVQQDPVVSQVKLIAEPWDVGEGGYQVGNFPPLWTEWNGKYRDCVRDLWRGEPRTLAEFASRLTGSSDLYQDDGRRPLASVNFVTCHDGFTLRDLVSYNEKRNEANGEGNRDGENYNRSWNCGEEGETEDVGITELRARQMRNFLATLMLSQGVPMLSHGDEFGRTQGGNNNAYCQDNEVSWVRWPKENSEAEATLLRFTRSMVRLRREHPVFRRRRFFHGRPVEGTHDELTDIAWFTPEGEEMTSRDWQAAHAQALTVFLNGNAISEPGTQGERIADDSFLLMFNASAKELEFVVPDSHGRYWRMVVDTSDPEGMPPQQGPELAGGERVTLAPLSLTVLRRPA
Glycogen debranching enzyme GlgX L 709 Streptomyces Venezuelae GSHMQVWPGQAYPLGATYDGAGTNFAVFSEAAHRIELCLLHDDGSETAVELRETDAFVRHAYLPGVMPGQRYGFRVHGPYAPERGLRCNAAKLLLDPYARAVSGRVRWGEAVYGYPFGRPDARNDLDSAPDTMTSVVVNPYFDWGDDRRPRTEYHHTVIYEAHVKGLTMLHPDLPEELRGTYAGLAHPSVIGHLRELGVTALELMPVHQFVNDHRLVDAGLSNYWGYNTIGFFAPHNAYASWGDRGQQVLEFKSAVRALHQAGIEVILDVVYNHTAEGNHLGPTLSMRGLDNPSYYRLADDPRYYMDTTGTGNSLLMRSPHVLQLIMDSLRYWVTEMHVDGFRFDLAATLARQFHEVDRLSSFFDLVQQDPVVSQVKLIAEPWDVGEGGYQVGNFPPLWTEWNGKYRDCVRDLWRGEPRTLAEFASRLTGSSDLYQDDGRRPLASVNFVTCHDGFTLRDLVSYNEKRNEANGEGNRDGENYNRSWNCGEEGETEDVGITELRARQMRNFLATLMLSQGVPMLSHGDEFGRTQGGNNNAYCQDNEVSWVRWPKENSEAEATLLRFTRSMVRLRREHPVFRRRRFFHGRPVEGTHDELTDIAWFTPEGEEMTSRDWQAAHAQALTVFLNGNAISEPGTQGERIADDSFLLMFNASAKELEFVVPDSHGRYWRMVVDTSDPEGMPPQQGPELAGGERVTLAPLSLTVLRRPA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-02-26
Deposition Author(s): Schumacher, M.A.