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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7TR8

Cascade complex from type i-a crispr-cas system

PDB DOI: 10.2210/pdb7tr8/pdb

Classification: RNA BINDING PROTEIN
Organism(s): Escherichia Coli , Pyrococcus Furiosus Dsm 3638

Deposited: 2022-01-28
Deposition Author(s): Hu, C. , Ke, A. , Majumdar, S. , Mclean, J. , Nam, K.H. , Ni, D. , Stahlberg, H. , Terns, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

7tr8
Literature

Cascade complex from type i-a crispr-cas system

Hu, C. , Ke, A. , Majumdar, S. , Mclean, J. , Nam, K.H. , Ni, D. , Stahlberg, H. , Terns, M.

Primary Citation of Related Structures: 7TR8


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated helicase Cas3 A 572 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 ELTGFEPYDYQLRAWEKIREIMNNGGKVIIEVPTAGGKTETAVMPFFAGIYNNNWPVARLVYVLPTRSLVEKQAERLRNLVYKLLQLKGKSKEEAEKLARELVVVEYGLEKTHAFLGWVVVTTWDAFLYGLAAHRTVGNRFTFPAGAIAQSLVIFDEVQMYQDESMYMPRLLSLVVGILEEANVPLVIMSATIPSKLREMIAGDTEVITVDKNDKNKPSKGNVKVRLVEGDITDVLNDIKKILKNGKKVLVVRNTVRKAVETYQVLKKKLNDTLANPSDALLIHSRFTIGDRREKERALDSARLIVATQVVEAGLDLPNVGLVVTDIAPLDALIQRIGRCARRPGEEGEGIILIPAAAAAAAAAAAAAAAAAAAAAAAAAAAAVVTSTNEYDRVVEIHYGEGKKNFVYVGDIDTARRVLEKKRSKKLPKDLYIIPYSVSPYPDPLVLLTTYDELSKIGEYLADTTKARKALDRVYKFHYENNIVPKEFASYIYFKELKLFSAPPEYEKAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAIDAKYYNSELAAAAAAAAAAAAAAAAAAA
Cas8 C 341 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 FNEFKTPQIDPIFDLYVAYGYVVSLIRGGAKEATLIPHGASYLIQTDVSNEEFRHGLVDALSSMLSLHIALARHSPREGGKLVSDADFSAGANINNVYWDSVPRNLEKLMKDLEKKRSVKGTATIPITLMPSAGKYMLKHFGVQGGNPIKVDLLNYALAWVGFHYYTPYIKYAKGDTTWIHIYQIAPVEEVDMISILSLKDLKMHLPHYYESNLDFLINRRLALLYHLLHSEALELFTEKEFVIHSYTLERSGNNQAIRSFEEEEIGKLMDFLWKLKRRDFYHAIKFIDDLLKKATEGALALIDAIMNERLEGFYTALKLGKKAGVVSSREIVAALEDIIC
Cas11a D 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a E 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a F 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a G 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a H 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas7a I 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a J 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a K 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a L 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a M 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a N 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a O 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas5a P 256 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MDILLVCLRFPFFSVAKRSYQVRTSFLLPPPSALKGALAKGLILLKPEKYASSSLDEAALKAIKEIESKLVDIKAVSVAPLSPLIRNAFLLKRLRNLESGSNAEKSDAMRREYTFTRELLVAYIFKNLTQEEKNLYLKAAMLIDVIGDTESLATPVWASFVKPEDKKAPLAFSAPYTEIYSLLSSKIQAKGKIRMYIEKMRVSPEYSKTKGPQEEIFYLPIEERRYKRIVYYARIYPPEVEKALTVDGEVLGIWIP
CRISPR-associated endonuclease Cas3-HD Q 237 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 SCKAFQGQTLREHIEAMLAAWEIVKNKYIPSIIRVMKTVGVKFTEEDADKFMKTLIILHDVGKCSEVYQKHLSNNEPLRGFRHELVSAYYAYNILKDMFKDETIAFIGALVVMMHHEPILMGQIRSLDKEELTPEVVLDKLRTFNGVMEGTESFIKSMIKEKLGVIPKVPSPTQEDVLREVIRLSVLARHRPDSGKLRMVVGALLIPLVCDYKGAAAAAAAAAAAAAAAAAAAAAAA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
crRNA (45-MER) r 45 NA AUUGAAAGAGUGCUUCCCCAAACCCUUAACUGGUUGUAACAGUUG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-01-28
Deposition Author(s): Hu, C. , Ke, A. , Majumdar, S. , Mclean, J. , Nam, K.H. , Ni, D. , Stahlberg, H. , Terns, M.