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7TFO

Cryo-em structure of hiv-1 env trimer bg505 sosip.664 in complex with cd4bs antibody ab1573

PDB DOI: 10.2210/pdb7tfo/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Human Immunodeficiency Virus 1 , Macaca Mulatta

Deposited: 2022-01-06
Deposition Author(s): Bjorkman, P.J. , Yang, Z.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.1 Å

7tfo
Literature

Cryo-em structure of hiv-1 env trimer bg505 sosip.664 in complex with cd4bs antibody ab1573

Bjorkman, P.J. , Yang, Z.

Primary Citation of Related Structures: 7TFO


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein BG505 SOSIP.664 - gp120 A 481 Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Envelope glycoprotein BG505 SOSIP.664 - gp120 B 481 Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Envelope glycoprotein BG505 SOSIP.664 - gp120 C 481 Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
CD4 binding site antibody Ab1573 - Fab heavy chain H 228 Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLVQSGAEVKKPGASVKVSCKASGFTFGRYSFTWVRQAPGQGLEWVGVIVPLVGVTNSAKKFQGRVTITADTSTNTVYMDLSSLRSEDTAVYYCARVGDRFGSGYAMDVWGRGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT
CD4 binding site antibody Ab1573 - Fab heavy chain I 228 Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLVQSGAEVKKPGASVKVSCKASGFTFGRYSFTWVRQAPGQGLEWVGVIVPLVGVTNSAKKFQGRVTITADTSTNTVYMDLSSLRSEDTAVYYCARVGDRFGSGYAMDVWGRGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT
CD4 binding site antibody Ab1573 - Fab heavy chain P 228 Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLVQSGAEVKKPGASVKVSCKASGFTFGRYSFTWVRQAPGQGLEWVGVIVPLVGVTNSAKKFQGRVTITADTSTNTVYMDLSSLRSEDTAVYYCARVGDRFGSGYAMDVWGRGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT
CD4 binding site antibody Ab1573 - Fab light chain J 216 Human Immunodeficiency Virus 1 , Macaca Mulatta QSALTQPPSVSGAPGERVTISCSGSGSNFEYSFVYWYQQVPGMAPKLLIYDNYKRPSGVSDRFSGSRSGTSASLTITGLQTEDESDYYCQSYDSSLTYWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
CD4 binding site antibody Ab1573 - Fab light chain L 216 Human Immunodeficiency Virus 1 , Macaca Mulatta QSALTQPPSVSGAPGERVTISCSGSGSNFEYSFVYWYQQVPGMAPKLLIYDNYKRPSGVSDRFSGSRSGTSASLTITGLQTEDESDYYCQSYDSSLTYWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
CD4 binding site antibody Ab1573 - Fab light chain Q 216 Human Immunodeficiency Virus 1 , Macaca Mulatta QSALTQPPSVSGAPGERVTISCSGSGSNFEYSFVYWYQQVPGMAPKLLIYDNYKRPSGVSDRFSGSRSGTSASLTITGLQTEDESDYYCQSYDSSLTYWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Envelope glycoprotein BG505 SOSIP.664 - gp41 X 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein BG505 SOSIP.664 - gp41 Y 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein BG505 SOSIP.664 - gp41 Z 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-01-06
Deposition Author(s): Bjorkman, P.J. , Yang, Z.