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7TFN

Cryo-em structure of cd4bs antibody ab1303 in complex with hiv-1 env trimer bg505 sosip.664

PDB DOI: 10.2210/pdb7tfn/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Human Immunodeficiency Virus 1 , Macaca Mulatta

Deposited: 2022-01-06
Deposition Author(s): Bjorkman, P.J. , Yang, Z.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.0 Å

7tfn
Literature

Cryo-em structure of cd4bs antibody ab1303 in complex with hiv-1 env trimer bg505 sosip.664

Bjorkman, P.J. , Yang, Z.

Primary Citation of Related Structures: 7TFN


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein BG505 SOSIP.664 - gp120 A 481 Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Envelope glycoprotein BG505 SOSIP.664 - gp120 B 481 Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Envelope glycoprotein BG505 SOSIP.664 - gp120 C 481 Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Anti-HIV-1 CD4bs antibody Fab Ab1303 - Heavy chain H 235 Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLQESGPGLVKPSETLSLTCAVSGGSISGNYWSWIRQSPGKGLEWIGHINDYSGRTDYNPSLKSRVTISTDTSTNQFFLTLSSVSAADTAVYYCARRDTDFWRGIYVFEFWGQGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
Anti-HIV-1 CD4bs antibody Fab Ab1303 - Heavy chain I 235 Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLQESGPGLVKPSETLSLTCAVSGGSISGNYWSWIRQSPGKGLEWIGHINDYSGRTDYNPSLKSRVTISTDTSTNQFFLTLSSVSAADTAVYYCARRDTDFWRGIYVFEFWGQGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
Anti-HIV-1 CD4bs antibody Fab Ab1303 - Heavy chain P 235 Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLQESGPGLVKPSETLSLTCAVSGGSISGNYWSWIRQSPGKGLEWIGHINDYSGRTDYNPSLKSRVTISTDTSTNQFFLTLSSVSAADTAVYYCARRDTDFWRGIYVFEFWGQGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
CD4 binding site antibody Fab Ab1303 - light chain J 217 Human Immunodeficiency Virus 1 , Macaca Mulatta QSVLTQSPSASASLGASVKLTCTLSSGLRSYTIAWYQRQRGQAPRFLLRLDSVGSHTKVDGIPDRFSGSSSGTERYLTISNLQSEDEADYFCQTWTTGIYIFGGGTRLSVLSQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
CD4 binding site antibody Fab Ab1303 - light chain L 217 Human Immunodeficiency Virus 1 , Macaca Mulatta QSVLTQSPSASASLGASVKLTCTLSSGLRSYTIAWYQRQRGQAPRFLLRLDSVGSHTKVDGIPDRFSGSSSGTERYLTISNLQSEDEADYFCQTWTTGIYIFGGGTRLSVLSQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
CD4 binding site antibody Fab Ab1303 - light chain Q 217 Human Immunodeficiency Virus 1 , Macaca Mulatta QSVLTQSPSASASLGASVKLTCTLSSGLRSYTIAWYQRQRGQAPRFLLRLDSVGSHTKVDGIPDRFSGSSSGTERYLTISNLQSEDEADYFCQTWTTGIYIFGGGTRLSVLSQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Envelope glycoprotein BG505 SOSIP.664 - gp41 X 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein BG505 SOSIP.664 - gp41 Y 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein BG505 SOSIP.664 - gp41 Z 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-01-06
Deposition Author(s): Bjorkman, P.J. , Yang, Z.