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FASTA Sequence PDB Format mmCIF Format
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7T9B

Apexgt5 in complex with gt5-d42.16 and rm20a3 fabs

PDB DOI: 10.2210/pdb7t9b/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus

Deposited: 2021-12-18
Deposition Author(s): Berndsen, Z.T. , Ward, A.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.72 Å

7t9b
Literature

Apexgt5 in complex with gt5-d42.16 and rm20a3 fabs

Berndsen, Z.T. , Ward, A.B.

Primary Citation of Related Structures: 7T9B


Proteins
Molecule Chains Sequence Length Organism Sequence
HIV-1 Envelope ApexGT5 gp120 A 473 Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNATTELRNKRQKVYSLFYRLDIVPMVDLWTNYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
HIV-1 Envelope ApexGT5 gp120 C 473 Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNATTELRNKRQKVYSLFYRLDIVPMVDLWTNYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
HIV-1 Envelope ApexGT5 gp120 E 473 Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNATTELRNKRQKVYSLFYRLDIVPMVDLWTNYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
HIV-1 Envelope ApexGT5 gp41 B 153 Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
HIV-1 Envelope ApexGT5 gp41 D 153 Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
HIV-1 Envelope ApexGT5 gp41 F 153 Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
RM20A3 Fab Heavy Chain J 125 Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS
RM20A3 Fab Heavy Chain M 125 Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS
RM20A3 Fab Heavy Chain O 125 Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS
RM20A3 Fab Light Chain K 128 Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL
RM20A3 Fab Light Chain N 128 Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL
RM20A3 Fab Light Chain P 128 Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL
GT5-d42.16 Fab Heavy Chain H 134 Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus EVQLVESGGGLVKPGGSLRLSCTASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTEGGTTDYATPVKGRFTISRDDSKDTLFLQMNSLKTEDTAVYYCNTGVETYDFWSGYDDHYYDYYFRDVWGKGTTVTVSS
GT5-d42.16 Fab Light Chain L 107 Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus EIVLTQSPGTLSLSPGERATLSCRASQIISSIYFAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSFTFGPGTKVDIK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-12-18
Deposition Author(s): Berndsen, Z.T. , Ward, A.B.