Apexgt5 in complex with gt5-d42.16 and rm20a3 fabs
PDB DOI: 10.2210/pdb7t9b/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus
Deposited: 2021-12-18 Deposition Author(s): Berndsen, Z.T. , Ward, A.B.
Apexgt5 in complex with gt5-d42.16 and rm20a3 fabs
Primary Citation of Related Structures: 7T9B
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
HIV-1 Envelope ApexGT5 gp120 | A | 473 | Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus | AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNATTELRNKRQKVYSLFYRLDIVPMVDLWTNYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
HIV-1 Envelope ApexGT5 gp120 | C | 473 | Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus | AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNATTELRNKRQKVYSLFYRLDIVPMVDLWTNYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
HIV-1 Envelope ApexGT5 gp120 | E | 473 | Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus | AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNATTELRNKRQKVYSLFYRLDIVPMVDLWTNYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
HIV-1 Envelope ApexGT5 gp41 | B | 153 | Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus | AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
HIV-1 Envelope ApexGT5 gp41 | D | 153 | Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus | AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
HIV-1 Envelope ApexGT5 gp41 | F | 153 | Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus | AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
RM20A3 Fab Heavy Chain | J | 125 | Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus | EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS |
RM20A3 Fab Heavy Chain | M | 125 | Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus | EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS |
RM20A3 Fab Heavy Chain | O | 125 | Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus | EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS |
RM20A3 Fab Light Chain | K | 128 | Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus | ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL |
RM20A3 Fab Light Chain | N | 128 | Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus | ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL |
RM20A3 Fab Light Chain | P | 128 | Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus | ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL |
GT5-d42.16 Fab Heavy Chain | H | 134 | Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus | EVQLVESGGGLVKPGGSLRLSCTASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTEGGTTDYATPVKGRFTISRDDSKDTLFLQMNSLKTEDTAVYYCNTGVETYDFWSGYDDHYYDYYFRDVWGKGTTVTVSS |
GT5-d42.16 Fab Light Chain | L | 107 | Human Immunodeficiency Virus 1 , Macaca Mulatta , Mus Musculus | EIVLTQSPGTLSLSPGERATLSCRASQIISSIYFAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSFTFGPGTKVDIK |
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-12-18 Deposition Author(s): Berndsen, Z.T. , Ward, A.B.