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FASTA Sequence PDB Format mmCIF Format
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7T2D

Crystal structure of the b1 tcr in complex with hla-dp4-ply

PDB DOI: 10.2210/pdb7t2d/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Streptococcus Pneumoniae

Deposited: 2021-12-03
Deposition Author(s): Ciacchi, L. , Farenc, C. , Petersen, J. , Reid, H.H. , Rossjohn, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.4 Å

Literature

Crystal structure of the b1 tcr in complex with hla-dp4-ply

Ciacchi, L. , Farenc, C. , Petersen, J. , Reid, H.H. , Rossjohn, J.

Primary Citation of Related Structures: 7T2D


Proteins
Molecule Chains Sequence Length Organism Sequence
HLA class II histocompatibility antigen, DP alpha 1 chain A 181 Homo Sapiens , Streptococcus Pneumoniae IKADHVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTLIQRSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQ
HLA class II histocompatibility antigen, DP alpha 1 chain F 181 Homo Sapiens , Streptococcus Pneumoniae IKADHVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTLIQRSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQ
HLA class II histocompatibility antigen, DP alpha 1 chain K 181 Homo Sapiens , Streptococcus Pneumoniae IKADHVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTLIQRSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQ
HLA class II histocompatibility antigen, DP alpha 1 chain P 181 Homo Sapiens , Streptococcus Pneumoniae IKADHVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTLIQRSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQ
HLA class II histocompatibility antigen, DP beta 1 chain B 188 Homo Sapiens , Streptococcus Pneumoniae RATPENYLFQGRQECYAFNGTQRFLERYIYNREEFARFDSDVGEFRAVTELGRPAAEYWNSQKDILEEKRAVPDRMCRHNYELGGPMTLQRRVQPRVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYTCQVEHTSLDSPVTVEWKA
HLA class II histocompatibility antigen, DP beta 1 chain G 188 Homo Sapiens , Streptococcus Pneumoniae RATPENYLFQGRQECYAFNGTQRFLERYIYNREEFARFDSDVGEFRAVTELGRPAAEYWNSQKDILEEKRAVPDRMCRHNYELGGPMTLQRRVQPRVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYTCQVEHTSLDSPVTVEWKA
HLA class II histocompatibility antigen, DP beta 1 chain L 188 Homo Sapiens , Streptococcus Pneumoniae RATPENYLFQGRQECYAFNGTQRFLERYIYNREEFARFDSDVGEFRAVTELGRPAAEYWNSQKDILEEKRAVPDRMCRHNYELGGPMTLQRRVQPRVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYTCQVEHTSLDSPVTVEWKA
HLA class II histocompatibility antigen, DP beta 1 chain Q 188 Homo Sapiens , Streptococcus Pneumoniae RATPENYLFQGRQECYAFNGTQRFLERYIYNREEFARFDSDVGEFRAVTELGRPAAEYWNSQKDILEEKRAVPDRMCRHNYELGGPMTLQRRVQPRVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYTCQVEHTSLDSPVTVEWKA
Pneumolysin-derived peptide C 15 Homo Sapiens , Streptococcus Pneumoniae GATGLAWEWWRTVYE
Pneumolysin-derived peptide H 15 Homo Sapiens , Streptococcus Pneumoniae GATGLAWEWWRTVYE
Pneumolysin-derived peptide M 15 Homo Sapiens , Streptococcus Pneumoniae GATGLAWEWWRTVYE
Pneumolysin-derived peptide R 15 Homo Sapiens , Streptococcus Pneumoniae GATGLAWEWWRTVYE
T cell receptor, B1, alpha chain D 207 Homo Sapiens , Streptococcus Pneumoniae AQKVTQAQTEISVVEKEDVTLDCVYETRDTTYYLFWYKQPPSGELVFLIRRNSFDEQNEISGRYSWNFQKSTSSFNFTITASQVVDSAVYFCALSGSARQLTFGSGTQLTVLPDIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS
T cell receptor, B1, alpha chain I 207 Homo Sapiens , Streptococcus Pneumoniae AQKVTQAQTEISVVEKEDVTLDCVYETRDTTYYLFWYKQPPSGELVFLIRRNSFDEQNEISGRYSWNFQKSTSSFNFTITASQVVDSAVYFCALSGSARQLTFGSGTQLTVLPDIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS
T cell receptor, B1, alpha chain N 207 Homo Sapiens , Streptococcus Pneumoniae AQKVTQAQTEISVVEKEDVTLDCVYETRDTTYYLFWYKQPPSGELVFLIRRNSFDEQNEISGRYSWNFQKSTSSFNFTITASQVVDSAVYFCALSGSARQLTFGSGTQLTVLPDIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS
T cell receptor, B1, alpha chain S 207 Homo Sapiens , Streptococcus Pneumoniae AQKVTQAQTEISVVEKEDVTLDCVYETRDTTYYLFWYKQPPSGELVFLIRRNSFDEQNEISGRYSWNFQKSTSSFNFTITASQVVDSAVYFCALSGSARQLTFGSGTQLTVLPDIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS
T cell receptor, B1, beta chain E 243 Homo Sapiens , Streptococcus Pneumoniae GAGVSQTPSNKVTEKGKYVELRCDPISGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSAVYLCASSHREGETQYFGPGTRLLVLEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
T cell receptor, B1, beta chain J 243 Homo Sapiens , Streptococcus Pneumoniae GAGVSQTPSNKVTEKGKYVELRCDPISGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSAVYLCASSHREGETQYFGPGTRLLVLEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
T cell receptor, B1, beta chain O 243 Homo Sapiens , Streptococcus Pneumoniae GAGVSQTPSNKVTEKGKYVELRCDPISGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSAVYLCASSHREGETQYFGPGTRLLVLEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
T cell receptor, B1, beta chain T 243 Homo Sapiens , Streptococcus Pneumoniae GAGVSQTPSNKVTEKGKYVELRCDPISGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSAVYLCASSHREGETQYFGPGTRLLVLEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-12-03
Deposition Author(s): Ciacchi, L. , Farenc, C. , Petersen, J. , Reid, H.H. , Rossjohn, J.