7T0R
Crystal structure of the anti-cd4 adnectin 6940_b01 as a complex with the extracellular domains of cd4 and ibalizumab fab
PDB DOI: 10.2210/pdb7t0r/pdb
Classification: ANTIVIRAL PROTEIN Organism(s): Homo Sapiens , Mus Musculus , Synthetic Construct
Deposited: 2021-11-30 Deposition Author(s): Concha, N.O. , Hong, X. , Wensel, D.L. , Williams, S.P.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.65 Å
Crystal structure of the anti-cd4 adnectin 6940_b01 as a complex with the extracellular domains of cd4 and ibalizumab fab
Concha, N.O. , Hong, X. , Wensel, D.L. , Williams, S.P.
Primary Citation of Related Structures: 7T0R
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Ibalizumab Light Chain | L | 219 | Homo Sapiens , Mus Musculus , Synthetic Construct | DIVMTQSPDSLAVSLGERVTMNCKSSQSLLYSTNQKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSVQAEDVAVYYCQQYYSYRTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| Ibalizumab Light Chain | B | 219 | Homo Sapiens , Mus Musculus , Synthetic Construct | DIVMTQSPDSLAVSLGERVTMNCKSSQSLLYSTNQKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSVQAEDVAVYYCQQYYSYRTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| Ibalizumab Heavy Chain | H | 229 | Homo Sapiens , Mus Musculus , Synthetic Construct | QVQLQQSGPEVVKPGASVKMSCKASGYTFTSYVIHWVRQKPGQGLDWIGYINPYNDGTDYDEKFKGKATLTSDTSTSTAYMELSSLRSEDTAVYYCAREKDNYATGAWFAYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGDKTH |
| Ibalizumab Heavy Chain | C | 229 | Homo Sapiens , Mus Musculus , Synthetic Construct | QVQLQQSGPEVVKPGASVKMSCKASGYTFTSYVIHWVRQKPGQGLDWIGYINPYNDGTDYDEKFKGKATLTSDTSTSTAYMELSSLRSEDTAVYYCAREKDNYATGAWFAYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGDKTH |
| T-cell surface glycoprotein CD4 | A | 373 | Homo Sapiens , Mus Musculus , Synthetic Construct | KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDSGQVLLESNIKVLPTGSHHHHHHH |
| T-cell surface glycoprotein CD4 | D | 373 | Homo Sapiens , Mus Musculus , Synthetic Construct | KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDSGQVLLESNIKVLPTGSHHHHHHH |
| Adnectin 6940_B01 | G | 94 | Homo Sapiens , Mus Musculus , Synthetic Construct | GVSDVPRDLEVVAATPTSLLISWDAPAVTVHSYHIQYWPLGSYQRYQVFSVPGSKSTATISGLKPGVEYQIRVYAETGGADQSMGWIQIGYRTE |
| Adnectin 6940_B01 | I | 94 | Homo Sapiens , Mus Musculus , Synthetic Construct | GVSDVPRDLEVVAATPTSLLISWDAPAVTVHSYHIQYWPLGSYQRYQVFSVPGSKSTATISGLKPGVEYQIRVYAETGGADQSMGWIQIGYRTE |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2021-11-30 Deposition Author(s): Concha, N.O. , Hong, X. , Wensel, D.L. , Williams, S.P.