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FASTA Sequence PDB Format mmCIF Format
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7T0O

Cryoem reconstruction of the hiv gp140 in complex with the extracellular domains of cd4 and the adnectin domain of combinectin. the gp140 and cd4 coordinates from entry 6edu were rigid body fitted to the em map along withe the crystal structure of cd4+adnectin

PDB DOI: 10.2210/pdb7t0o/pdb

Classification: ANTIVIRAL PROTEIN
Organism(s): Hiv-1 06Tg.Ht008 , Homo Sapiens

Deposited: 2021-11-30
Deposition Author(s): Concha, N.O. , Wenzel, D.L. , William, S.P.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 8.7 Å

Literature

Cryoem reconstruction of the hiv gp140 in complex with the extracellular domains of cd4 and the adnectin domain of combinectin. the gp140 and cd4 coordinates from entry 6edu were rigid body fitted to the em map along withe the crystal structure of cd4+adnectin

Concha, N.O. , Wenzel, D.L. , William, S.P.

Primary Citation of Related Structures: 7T0O


Proteins
Molecule Chains Sequence Length Organism Sequence
BG505 SOSIP.664 gp140 D 650 Hiv-1 06Tg.Ht008 , Homo Sapiens AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLNCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALDGSGSGGSGHHHHHHHH
BG505 SOSIP.664 gp140 G 650 Hiv-1 06Tg.Ht008 , Homo Sapiens AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLNCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALDGSGSGGSGHHHHHHHH
BG505 SOSIP.664 gp140 I 650 Hiv-1 06Tg.Ht008 , Homo Sapiens AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLNCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALDGSGSGGSGHHHHHHHH
BG505 SOSIP.664 gp140 B 39 Hiv-1 06Tg.Ht008 , Homo Sapiens XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
BG505 SOSIP.664 gp140 F 38 Hiv-1 06Tg.Ht008 , Homo Sapiens XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
BG505 SOSIP.664 gp140 J 38 Hiv-1 06Tg.Ht008 , Homo Sapiens XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
T-cell surface glycoprotein CD4 H 370 Hiv-1 06Tg.Ht008 , Homo Sapiens KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDSGQVLLESNIKVLPTHHHHHH
T-cell surface glycoprotein CD4 L 370 Hiv-1 06Tg.Ht008 , Homo Sapiens KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDSGQVLLESNIKVLPTHHHHHH
T-cell surface glycoprotein CD4 M 370 Hiv-1 06Tg.Ht008 , Homo Sapiens KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDSGQVLLESNIKVLPTHHHHHH
Adnectin O 108 Hiv-1 06Tg.Ht008 , Homo Sapiens GVSDVPRDLEVVAATPTSLLISWDAPAVTVHSYHIQYWPLGSYQRYQVFSVPGSKSTATISGLKPGVEYQIRVYAETGGADSDQSMGWIQIGYRTEGDKPSQHHHHHH
Adnectin P 108 Hiv-1 06Tg.Ht008 , Homo Sapiens GVSDVPRDLEVVAATPTSLLISWDAPAVTVHSYHIQYWPLGSYQRYQVFSVPGSKSTATISGLKPGVEYQIRVYAETGGADSDQSMGWIQIGYRTEGDKPSQHHHHHH
Adnectin Q 108 Hiv-1 06Tg.Ht008 , Homo Sapiens GVSDVPRDLEVVAATPTSLLISWDAPAVTVHSYHIQYWPLGSYQRYQVFSVPGSKSTATISGLKPGVEYQIRVYAETGGADSDQSMGWIQIGYRTEGDKPSQHHHHHH
BG505 SOSIP.664 gp140 K 35 Hiv-1 06Tg.Ht008 , Homo Sapiens XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
BG505 SOSIP.664 gp140 N 35 Hiv-1 06Tg.Ht008 , Homo Sapiens XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
BG505 SOSIP.664 gp140 R 35 Hiv-1 06Tg.Ht008 , Homo Sapiens XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-11-30
Deposition Author(s): Concha, N.O. , Wenzel, D.L. , William, S.P.