7SZU
Crystal structure of pepper rna aptamer in complex with hbc ligand and fab bl3-6
PDB DOI: 10.2210/pdb7szu/pdb
Classification: IMMUNE SYSTEM/RNA Organism(s): Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2021-11-29 Deposition Author(s): Piccirilli, J.A. , Rees, H.C.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.24 Å
Crystal structure of pepper rna aptamer in complex with hbc ligand and fab bl3-6
Primary Citation of Related Structures: 7SZU
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA aptamer | r | 67 | NA | GGUACCUACCAAUCGUAGCGUGUCGACCAGCUGCGAAACACGCAGCUGGCACUGGCGCUGUAGGUAC |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| BL3-6 Fab heavy chain | H | 224 | Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS |
| BL3-6 Fab light chain | L | 213 | Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2021-11-29 Deposition Author(s): Piccirilli, J.A. , Rees, H.C.