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7SX6

Crystal structure of broadly neutralizing antibody n49p9.3 fab in complex with hiv-1 clade a/e strain 93th057 gp120 core

PDB DOI: 10.2210/pdb7sx6/pdb

Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2021-11-22
Deposition Author(s): Pazgier, M. , Tolbert, W.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.4 Å

7sx6
Literature

Crystal structure of broadly neutralizing antibody n49p9.3 fab in complex with hiv-1 clade a/e strain 93th057 gp120 core

Pazgier, M. , Tolbert, W.D.

Primary Citation of Related Structures: 7SX6


Proteins
Molecule Chains Sequence Length Organism Sequence
clade A/E 93TH057 HIV-1 gp120 core G 355 Homo Sapiens , Human Immunodeficiency Virus 1 VPVWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENFNMWKNNMVEQMQEDVISLWDQSLQPCVKLTGGSVIKQACPKISFDPIPIHYCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNGGSGSGGDIRKAYCEINGTKWNKVLKQVTEKLKEHFNNKTIIFQPPSGGDLEITMHSFNCRGEFFYCNTTQLFNNTCIGNETMKGCNGTITLPCKIKQIINMWQGTGQAMYAPPIDGKINCVSNITGILLTRDGGANNTSNETFRPGGGNIKDNWRSELYKYKVVQIE
clade A/E 93TH057 HIV-1 gp120 core A 355 Homo Sapiens , Human Immunodeficiency Virus 1 VPVWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENFNMWKNNMVEQMQEDVISLWDQSLQPCVKLTGGSVIKQACPKISFDPIPIHYCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNGGSGSGGDIRKAYCEINGTKWNKVLKQVTEKLKEHFNNKTIIFQPPSGGDLEITMHSFNCRGEFFYCNTTQLFNNTCIGNETMKGCNGTITLPCKIKQIINMWQGTGQAMYAPPIDGKINCVSNITGILLTRDGGANNTSNETFRPGGGNIKDNWRSELYKYKVVQIE
N49P9.3 ANTIBODY FAB HEAVY CHAIN H 223 Homo Sapiens , Human Immunodeficiency Virus 1 HVQLVQSGGGVKKIGAAVRISCEVSGYNFMDQFINWVRQAPGQGLEWMGWMNPIYGQVNYSWRFQGRVTMTRDMYTDTAFMELRGLRVDDTAVYYCARGPSGENYPFHYWGQGVRVVVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
N49P9.3 ANTIBODY FAB HEAVY CHAIN B 223 Homo Sapiens , Human Immunodeficiency Virus 1 HVQLVQSGGGVKKIGAAVRISCEVSGYNFMDQFINWVRQAPGQGLEWMGWMNPIYGQVNYSWRFQGRVTMTRDMYTDTAFMELRGLRVDDTAVYYCARGPSGENYPFHYWGQGVRVVVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
N49P9.3 ANTIBODY FAB LIGHT CHAIN L 203 Homo Sapiens , Human Immunodeficiency Virus 1 LTQPASMSASPGQSVTISCSGTRHIISAWFQQYPGKPPKLIIFDDDKRPSGVPSRFSASRPGDTASLTISNVQPEDEATYICNTYEFFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLVSDFYPGAVTVAWKADGSPVKVGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCRVTHEGSTVEKTVAPAECS
N49P9.3 ANTIBODY FAB LIGHT CHAIN C 203 Homo Sapiens , Human Immunodeficiency Virus 1 LTQPASMSASPGQSVTISCSGTRHIISAWFQQYPGKPPKLIIFDDDKRPSGVPSRFSASRPGDTASLTISNVQPEDEATYICNTYEFFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLVSDFYPGAVTVAWKADGSPVKVGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCRVTHEGSTVEKTVAPAECS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-11-22
Deposition Author(s): Pazgier, M. , Tolbert, W.D.