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7SWD

Structure of ebov gp lacking the mucin-like domain with 1c11 scfv and 1c3 fab bound

PDB DOI: 10.2210/pdb7swd/pdb

Classification: VIRAL PROTEIN/Immune System
Organism(s): Ebola Virus - Gabon (1994-1997) , Homo Sapiens , Zaire Ebolavirus

Deposited: 2021-11-19
Deposition Author(s): Milligan, J.C. , Saphire, E.O. , Yu, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.59 Å

7swd
Literature

Structure of ebov gp lacking the mucin-like domain with 1c11 scfv and 1c3 fab bound

Milligan, J.C. , Saphire, E.O. , Yu, X.

Primary Citation of Related Structures: 7SWD


Proteins
Molecule Chains Sequence Length Organism Sequence
Virion spike glycoprotein GP1 A 280 Ebola Virus - Gabon (1994-1997) , Homo Sapiens , Zaire Ebolavirus IPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYTSGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFTVVS
Virion spike glycoprotein GP1 C 280 Ebola Virus - Gabon (1994-1997) , Homo Sapiens , Zaire Ebolavirus IPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYTSGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFTVVS
Virion spike glycoprotein GP1 E 280 Ebola Virus - Gabon (1994-1997) , Homo Sapiens , Zaire Ebolavirus IPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYTSGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFTVVS
Virion spike glycoprotein GP2 B 96 Ebola Virus - Gabon (1994-1997) , Homo Sapiens , Zaire Ebolavirus IVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGG
Virion spike glycoprotein GP2 D 96 Ebola Virus - Gabon (1994-1997) , Homo Sapiens , Zaire Ebolavirus IVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGG
Virion spike glycoprotein GP2 F 96 Ebola Virus - Gabon (1994-1997) , Homo Sapiens , Zaire Ebolavirus IVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGG
1C11 scFv G 253 Ebola Virus - Gabon (1994-1997) , Homo Sapiens , Zaire Ebolavirus QVQLVQSGAEVKKPGASVKVSCRTSGYTFSSYNIHWVRQAPGQGLEWMGVINPYGRSTTLYARRFRDRVTMTRDTSTSTVYMELSSLRSEDTAVYFCGRLYSGAPYGLDVWGQGSTVTVSSGTGGSGGGGSGGGGSGGGASDIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYVDWYLQKPGQSPQLLIYLGSSRASGVPDRFSGSGSGTDFTLKISRVETEDVGIYYCMQGLQTPLTFGGGTKVEIK
1C11 scFv H 253 Ebola Virus - Gabon (1994-1997) , Homo Sapiens , Zaire Ebolavirus QVQLVQSGAEVKKPGASVKVSCRTSGYTFSSYNIHWVRQAPGQGLEWMGVINPYGRSTTLYARRFRDRVTMTRDTSTSTVYMELSSLRSEDTAVYFCGRLYSGAPYGLDVWGQGSTVTVSSGTGGSGGGGSGGGGSGGGASDIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYVDWYLQKPGQSPQLLIYLGSSRASGVPDRFSGSGSGTDFTLKISRVETEDVGIYYCMQGLQTPLTFGGGTKVEIK
1C11 scFv I 253 Ebola Virus - Gabon (1994-1997) , Homo Sapiens , Zaire Ebolavirus QVQLVQSGAEVKKPGASVKVSCRTSGYTFSSYNIHWVRQAPGQGLEWMGVINPYGRSTTLYARRFRDRVTMTRDTSTSTVYMELSSLRSEDTAVYFCGRLYSGAPYGLDVWGQGSTVTVSSGTGGSGGGGSGGGGSGGGASDIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYVDWYLQKPGQSPQLLIYLGSSRASGVPDRFSGSGSGTDFTLKISRVETEDVGIYYCMQGLQTPLTFGGGTKVEIK
1C3 heavy chain J 124 Ebola Virus - Gabon (1994-1997) , Homo Sapiens , Zaire Ebolavirus QVQLVQSGAEVKKPGSSVKVACKVSGGTFSSYTISWVRQAPGQGLEWMGGIIPSFGVGHYSQKFRDRVTLTADKSTTTAFLELSSVRSEDTALYYCAILGTFNWKSGGNYFGPWGQGTLVTVSS
1C3 light chain K 115 Ebola Virus - Gabon (1994-1997) , Homo Sapiens , Zaire Ebolavirus DIVLTQSPDSLAASLGERATISCKSSHSVLYSSNNKDFFAWYQQKPGQPPKLLISWASTRESGVPVRFNGGGSGTHFTLTISSLQAEDVAVYYCQQYFSSPITFGQGTRLEIKRT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-11-19
Deposition Author(s): Milligan, J.C. , Saphire, E.O. , Yu, X.