PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7SUM

Crystal structure of human ligase i with nick duplexes containing cognate a:t

PDB DOI: 10.2210/pdb7sum/pdb

Classification: LIGASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2021-11-17
Deposition Author(s): Caglayan, M. , Gulkis, M. , Mckenna, R. , Tang, Q.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

7sum
Literature

Crystal structure of human ligase i with nick duplexes containing cognate a:t

Caglayan, M. , Gulkis, M. , Mckenna, R. , Tang, Q.

Primary Citation of Related Structures: 7SUM


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA ligase 1 A 658 Homo Sapiens , Synthetic Construct LDPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLALGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQADNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPEDT

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA(5'-*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*A-3') b 11 NA GCTGATGCGTA
DNA(5'-P*GP*TP*CP*GP*GP*AP*C-3') c 7 NA GTCGGAC
DNA(5'-*GP*TP*CP*CP*GP*AP*CP*TP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C-3') d 18 NA GTCCGACTACGCATCAGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-11-17
Deposition Author(s): Caglayan, M. , Gulkis, M. , Mckenna, R. , Tang, Q.