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7SUM

Crystal structure of human ligase i with nick duplexes containing cognate a:t

PDB DOI: 10.2210/pdb7sum/pdb

Classification: LIGASE/DNA
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2021-11-17
Deposition Author(s): Caglayan, M. , Gulkis, M. , Mckenna, R. , Tang, Q.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

7sum
Literature

Crystal structure of human ligase i with nick duplexes containing cognate a:t

Caglayan, M. , Gulkis, M. , Mckenna, R. , Tang, Q.

Primary Citation of Related Structures: 7SUM


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA ligase 1 A 658 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) LDPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLALGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQADNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPEDT

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA(5'-*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*A-3') b 11 NA GCTGATGCGTA
DNA(5'-P*GP*TP*CP*GP*GP*AP*C-3') c 7 NA GTCGGAC
DNA(5'-*GP*TP*CP*CP*GP*AP*CP*TP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C-3') d 18 NA GTCCGACTACGCATCAGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-11-17
Deposition Author(s): Caglayan, M. , Gulkis, M. , Mckenna, R. , Tang, Q.