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7SS5

Activated sgrai endonuclease dna-bound dimer with ca2+ and intact primary site dna

PDB DOI: 10.2210/pdb7ss5/pdb

Classification: HYDROLASE/DNA
Organism(s): Streptomyces Griseus , Synthetic Construct

Deposited: 2021-11-09
Deposition Author(s): Horton, N.C. , Lyumkis, D. , Shan, Z.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.7 Å

7ss5
Literature

Activated sgrai endonuclease dna-bound dimer with ca2+ and intact primary site dna

Horton, N.C. , Lyumkis, D. , Shan, Z.

Primary Citation of Related Structures: 7SS5


Proteins
Molecule Chains Sequence Length Organism Sequence
SgraIR restriction enzyme A 352 Streptomyces Griseus , Synthetic Construct MPFTYSIEATRNLATTERCIQDIRNAPVRNRSTQFQLAQQNMLAYTFGEVIPGFASAGINGMDYRDVIGRPVENAVTEGTHFFRDDFRVDSNAKAKVAGDIFEIVSSAVMWNCAARWNSLMVGEGWRSQPRYSRPTLSPSPRRQVAVLNLPRSFDWVSLLVPESQEVIEEFRAGLRKDGLGLPTSTPDLAVVVLPEEFQNDEMWREEIAGLTRPNQILLSGAYQRLQGRVQPGEISLAVAFKRSLRSDRLYQPLYEANVMQLLLEGKLGAPKVEFEVHTLAPEGTNAFVTYEAASLYGLAEGRSAVHRAIRELYVPPTAADLARRFFAFLNERMELVNGENLYFQSHHHHHH
SgraIR restriction enzyme B 352 Streptomyces Griseus , Synthetic Construct MPFTYSIEATRNLATTERCIQDIRNAPVRNRSTQFQLAQQNMLAYTFGEVIPGFASAGINGMDYRDVIGRPVENAVTEGTHFFRDDFRVDSNAKAKVAGDIFEIVSSAVMWNCAARWNSLMVGEGWRSQPRYSRPTLSPSPRRQVAVLNLPRSFDWVSLLVPESQEVIEEFRAGLRKDGLGLPTSTPDLAVVVLPEEFQNDEMWREEIAGLTRPNQILLSGAYQRLQGRVQPGEISLAVAFKRSLRSDRLYQPLYEANVMQLLLEGKLGAPKVEFEVHTLAPEGTNAFVTYEAASLYGLAEGRSAVHRAIRELYVPPTAADLARRFFAFLNERMELVNGENLYFQSHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*GP*GP*TP*CP*TP*TP*CP*AP*CP*AP*CP*CP*GP*GP*TP*GP*TP*GP*AP*AP*GP*AP*CP*C)-3') c 40 NA GATGCGTGGGTCTTCACACCGGTGTGAAGACCCACGCATC
DNA (5'-D(P*GP*GP*TP*CP*TP*TP*CP*AP*CP*AP*CP*CP*GP*GP*TP*GP*TP*GP*AP*AP*GP*AP*CP*C)-3') d 40 NA GATGCGTGGGTCTTCACACCGGTGTGAAGACCCACGCATC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-11-09
Deposition Author(s): Horton, N.C. , Lyumkis, D. , Shan, Z.