7SNQ
Hexamer hiv-1 ca in complex with cpsf6 peptide and ip6 ligand
PDB DOI: 10.2210/pdb7snq/pdb
Classification: VIRAL PROTEIN Organism(s): Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10)
Deposited: 2021-10-28 Deposition Author(s): Bester, S.M. , Kvaratskhelia, M.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.81 Å
Hexamer hiv-1 ca in complex with cpsf6 peptide and ip6 ligand
Bester, S.M. , Kvaratskhelia, M.
Primary Citation of Related Structures: 7SNQ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Capsid protein p24 | A | 231 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| Capsid protein p24 | B | 231 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| Capsid protein p24 | C | 231 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| Capsid protein p24 | D | 231 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| Capsid protein p24 | E | 231 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| Capsid protein p24 | F | 231 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| Capsid protein p24 | G | 231 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| Capsid protein p24 | H | 231 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| Capsid protein p24 | I | 231 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| Capsid protein p24 | J | 231 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| Capsid protein p24 | K | 231 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| Capsid protein p24 | L | 231 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| Cleavage and polyadenylation specificity factor subunit 6 | M | 15 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PVLFPGQPFGQPPLG |
| Cleavage and polyadenylation specificity factor subunit 6 | N | 15 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PVLFPGQPFGQPPLG |
| Cleavage and polyadenylation specificity factor subunit 6 | O | 15 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PVLFPGQPFGQPPLG |
| Cleavage and polyadenylation specificity factor subunit 6 | P | 15 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PVLFPGQPFGQPPLG |
| Cleavage and polyadenylation specificity factor subunit 6 | Q | 15 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PVLFPGQPFGQPPLG |
| Cleavage and polyadenylation specificity factor subunit 6 | R | 15 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PVLFPGQPFGQPPLG |
| Cleavage and polyadenylation specificity factor subunit 6 | S | 15 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PVLFPGQPFGQPPLG |
| Cleavage and polyadenylation specificity factor subunit 6 | T | 15 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PVLFPGQPFGQPPLG |
| Cleavage and polyadenylation specificity factor subunit 6 | U | 15 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PVLFPGQPFGQPPLG |
| Cleavage and polyadenylation specificity factor subunit 6 | V | 15 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PVLFPGQPFGQPPLG |
| Cleavage and polyadenylation specificity factor subunit 6 | W | 15 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PVLFPGQPFGQPPLG |
| Cleavage and polyadenylation specificity factor subunit 6 | X | 15 | Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) | PVLFPGQPFGQPPLG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2021-10-28 Deposition Author(s): Bester, S.M. , Kvaratskhelia, M.