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7S9P

Ternary complex of dna polymerase beta with template fapy-dg and an incoming dctp analog

PDB DOI: 10.2210/pdb7s9p/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2021-09-21
Deposition Author(s): Freudenthal, B.D. , Ryan, B.J. , Smith, M.R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.86 Å

7s9p
Literature

Ternary complex of dna polymerase beta with template fapy-dg and an incoming dctp analog

Freudenthal, B.D. , Ryan, B.J. , Smith, M.R.

Primary Citation of Related Structures: 7S9P


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*CP*GP*AP*CP*(FAP)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') t 16 NA CCGACXTCGCATCAGC
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3') p 10 NA GCTGATGCGA
DNA (5'-D(P*GP*TP*CP*GP*G)-3') d 5 NA GTCGG

Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase beta A 335 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-09-21
Deposition Author(s): Freudenthal, B.D. , Ryan, B.J. , Smith, M.R.