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7S81

Structure of human parp1 domains (zn1, zn3, wgr, hd) bound to a dna double strand break.

PDB DOI: 10.2210/pdb7s81/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2021-09-17
Deposition Author(s): Pascal, J.M. , Rouleau-Turcotte, E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.6 Å

Literature

Structure of human parp1 domains (zn1, zn3, wgr, hd) bound to a dna double strand break.

Pascal, J.M. , Rouleau-Turcotte, E.

Primary Citation of Related Structures: 7S81


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*TP*GP*CP*GP*GP*CP*CP*GP*CP*AP*T)-3') m 12 NA ATGCGGCCGCAT
DNA (5'-D(*AP*TP*GP*CP*GP*GP*CP*CP*GP*CP*AP*T)-3') l 12 NA ATGCGGCCGCAT
DNA (5'-D(*AP*TP*GP*CP*GP*GP*CP*CP*GP*CP*AP*T)-3') e 12 NA ATGCGGCCGCAT
DNA (5'-D(*AP*TP*GP*CP*GP*GP*CP*CP*GP*CP*AP*T)-3') d 12 NA ATGCGGCCGCAT

Proteins
Molecule Chains Sequence Length Organism Sequence
Poly [ADP-ribose] polymerase 1 C 266 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHLKGGAAVDPDSGLEHSAHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLEDDKENRYWIFRSWGRVGTVIGSNKLEQMPSKEDAIEHFMKLYEEKTGNAWHSKNFTKYPKKFYPLEIDYGQDEEAVKKLTVNPGTKFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKAEMLDNLLDIEVAYSLLRGGSDDSS
Poly [ADP-ribose] polymerase 1 K 266 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHLKGGAAVDPDSGLEHSAHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLEDDKENRYWIFRSWGRVGTVIGSNKLEQMPSKEDAIEHFMKLYEEKTGNAWHSKNFTKYPKKFYPLEIDYGQDEEAVKKLTVNPGTKFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKAEMLDNLLDIEVAYSLLRGGSDDSS
Poly [ADP-ribose] polymerase 1 P 266 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHLKGGAAVDPDSGLEHSAHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLEDDKENRYWIFRSWGRVGTVIGSNKLEQMPSKEDAIEHFMKLYEEKTGNAWHSKNFTKYPKKFYPLEIDYGQDEEAVKKLTVNPGTKFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKAEMLDNLLDIEVAYSLLRGGSDDSS
Poly [ADP-ribose] polymerase 1 H 266 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHLKGGAAVDPDSGLEHSAHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLEDDKENRYWIFRSWGRVGTVIGSNKLEQMPSKEDAIEHFMKLYEEKTGNAWHSKNFTKYPKKFYPLEIDYGQDEEAVKKLTVNPGTKFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKAEMLDNLLDIEVAYSLLRGGSDDSS
Poly [ADP-ribose] polymerase 1 N 116 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRHPDVEVDGFSELRWDDQQKVKKTAEAGGVTG
Poly [ADP-ribose] polymerase 1 I 116 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRHPDVEVDGFSELRWDDQQKVKKTAEAGGVTG
Poly [ADP-ribose] polymerase 1 A 116 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRHPDVEVDGFSELRWDDQQKVKKTAEAGGVTG
Poly [ADP-ribose] polymerase 1 F 116 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRHPDVEVDGFSELRWDDQQKVKKTAEAGGVTG
Poly [ADP-ribose] polymerase 1 G 160 Homo Sapiens , Synthetic Construct MVDEVAKKKSKKEKDKDSKLEKALKAQNDLIWNIKDELKKVCSTNDLKELLIFNKQQVPSGESAILDRVADGMVFGALLPCEECSGQLVFKSDAYYCTGDVTAWTKCMVKTQTPNRKEWVTPKEFREISYLKKLKVKKQDRIFPPETSASVALEHHHHHH
Poly [ADP-ribose] polymerase 1 O 160 Homo Sapiens , Synthetic Construct MVDEVAKKKSKKEKDKDSKLEKALKAQNDLIWNIKDELKKVCSTNDLKELLIFNKQQVPSGESAILDRVADGMVFGALLPCEECSGQLVFKSDAYYCTGDVTAWTKCMVKTQTPNRKEWVTPKEFREISYLKKLKVKKQDRIFPPETSASVALEHHHHHH
Poly [ADP-ribose] polymerase 1 J 160 Homo Sapiens , Synthetic Construct MVDEVAKKKSKKEKDKDSKLEKALKAQNDLIWNIKDELKKVCSTNDLKELLIFNKQQVPSGESAILDRVADGMVFGALLPCEECSGQLVFKSDAYYCTGDVTAWTKCMVKTQTPNRKEWVTPKEFREISYLKKLKVKKQDRIFPPETSASVALEHHHHHH
Poly [ADP-ribose] polymerase 1 B 160 Homo Sapiens , Synthetic Construct MVDEVAKKKSKKEKDKDSKLEKALKAQNDLIWNIKDELKKVCSTNDLKELLIFNKQQVPSGESAILDRVADGMVFGALLPCEECSGQLVFKSDAYYCTGDVTAWTKCMVKTQTPNRKEWVTPKEFREISYLKKLKVKKQDRIFPPETSASVALEHHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-09-17
Deposition Author(s): Pascal, J.M. , Rouleau-Turcotte, E.