Complex structure of methane monooxygenase hydroxylase and regulatory subunit dbl2
PDB DOI: 10.2210/pdb7s7h/pdb
Classification: OXIDOREDUCTASE Organism(s): Candida Dubliniensis (Strain Cd36 / Atcc Mya-646 / Cbs 7987 / Ncpf 3949 / Nrrl Y-17841)
Deposited: 2021-09-16 Deposition Author(s): Aihara, H. , Banerjee, R. , Johns, J.C. , Lipscomb, J.D. , Semonis, M.M. , Shi, K.
Complex structure of methane monooxygenase hydroxylase and regulatory subunit dbl2
Aihara, H. , Banerjee, R. , Johns, J.C. , Lipscomb, J.D. , Semonis, M.M. , Shi, K.
Primary Citation of Related Structures: 7S7H
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Methane monooxygenase component A alpha chain | A | 515 | Candida Dubliniensis (Strain Cd36 / Atcc Mya-646 / Cbs 7987 / Ncpf 3949 / Nrrl Y-17841) | DALKVNRAPVGVEPQEVHKWLQSFNWDFKENRTKYPTKYHMANETKEQFKVIAKEYARMEAAKDERQFGTLLDGLTRLGAGNKVHPRWGETMKVISNFLEVGEYNAIAASAMLWDSATAAEQKNGYLAQVLDEIRHTHQCAFINHYYSKHYHDPAGHNDARRTRAIGPLWKGMKRVFADGFISGDAVECSVNLQLVGEACFTNPLIVAVTEWASANGDEITPTVFLSVETDELRHMANGYQTVVSIANDPASAKFLNTDLNNAFWTQQKYFTPVLGYLFEYGSKFKVEPWVKTWNRWVYEDWGGIWIGRLGKYGVESPASLRDAKRDAYWAHHDLALAAYAMWPLGFARLALPDEEDQAWFEANYPGWADHYGKIFNEWKKLGYEDPKSGFIPYQWLLANGHDVYIDRVSQVPFIPSLAKGTGSLRVHEFNGKKHSLTDDWGERQWLIEPERYECHNVFEQYEGRELSEVIAEGHGVRSDGKTLIAQPHTRGDNLWTLEDIKRAGCVFPDPLAKF |
Methane monooxygenase component A alpha chain | E | 515 | Candida Dubliniensis (Strain Cd36 / Atcc Mya-646 / Cbs 7987 / Ncpf 3949 / Nrrl Y-17841) | DALKVNRAPVGVEPQEVHKWLQSFNWDFKENRTKYPTKYHMANETKEQFKVIAKEYARMEAAKDERQFGTLLDGLTRLGAGNKVHPRWGETMKVISNFLEVGEYNAIAASAMLWDSATAAEQKNGYLAQVLDEIRHTHQCAFINHYYSKHYHDPAGHNDARRTRAIGPLWKGMKRVFADGFISGDAVECSVNLQLVGEACFTNPLIVAVTEWASANGDEITPTVFLSVETDELRHMANGYQTVVSIANDPASAKFLNTDLNNAFWTQQKYFTPVLGYLFEYGSKFKVEPWVKTWNRWVYEDWGGIWIGRLGKYGVESPASLRDAKRDAYWAHHDLALAAYAMWPLGFARLALPDEEDQAWFEANYPGWADHYGKIFNEWKKLGYEDPKSGFIPYQWLLANGHDVYIDRVSQVPFIPSLAKGTGSLRVHEFNGKKHSLTDDWGERQWLIEPERYECHNVFEQYEGRELSEVIAEGHGVRSDGKTLIAQPHTRGDNLWTLEDIKRAGCVFPDPLAKF |
Methane monooxygenase beta chain | B | 392 | Candida Dubliniensis (Strain Cd36 / Atcc Mya-646 / Cbs 7987 / Ncpf 3949 / Nrrl Y-17841) | PQSSQVTKRGLTDPERAAIIAAAVPDHALDTQRKYHYFIQPRWKRLSEYEQLSCYAQPNPDWIAGGLDWGDWTQKFHGGRPSWGNESTELRTTDWYRHRDPARRWHHPYVKDKSEEARYTQRFLAAYSSEGSIRTIDPYWRDEILNKYFGALLYSEYGLFNAHSSVGRDCLSDTIRQTAVFAALDKVDNAQMIQMERLFIAKLVPGFDASTDVPKKIWTTDPIYSGARATVQEIWQGVQDWNEILWAGHAVYDATFGQFARREFFQRLATVYGDTLTPFFTAQSQTYFQTTRGAIDDLFVYCLANDSEFGAHNRTFLNAWTEHYLASSVAALKDFVGLYAKVEKVAGATDRAGVSEALQRVFGDWKIDYADKIGFRVDVDQKVDAVLAGYKN |
Methane monooxygenase beta chain | F | 392 | Candida Dubliniensis (Strain Cd36 / Atcc Mya-646 / Cbs 7987 / Ncpf 3949 / Nrrl Y-17841) | PQSSQVTKRGLTDPERAAIIAAAVPDHALDTQRKYHYFIQPRWKRLSEYEQLSCYAQPNPDWIAGGLDWGDWTQKFHGGRPSWGNESTELRTTDWYRHRDPARRWHHPYVKDKSEEARYTQRFLAAYSSEGSIRTIDPYWRDEILNKYFGALLYSEYGLFNAHSSVGRDCLSDTIRQTAVFAALDKVDNAQMIQMERLFIAKLVPGFDASTDVPKKIWTTDPIYSGARATVQEIWQGVQDWNEILWAGHAVYDATFGQFARREFFQRLATVYGDTLTPFFTAQSQTYFQTTRGAIDDLFVYCLANDSEFGAHNRTFLNAWTEHYLASSVAALKDFVGLYAKVEKVAGATDRAGVSEALQRVFGDWKIDYADKIGFRVDVDQKVDAVLAGYKN |
Methane monooxygenase gamma chain | C | 168 | Candida Dubliniensis (Strain Cd36 / Atcc Mya-646 / Cbs 7987 / Ncpf 3949 / Nrrl Y-17841) | AKREPIHDNSIRTEWEAKIAKLTSVDQATKFIQDFRLAYTSPFRKSYDIDVDYQYIERKIEEKLSVLKTEKLPVADLITKATTGEDAAAVEATWIAKIKAAKSKYEAERIHIEFRQLYKPPVLPVNVFLRTDAALGTVLMEIRNTDYYGTPLEGLRKERGVKVLHLQA |
Methane monooxygenase gamma chain | G | 168 | Candida Dubliniensis (Strain Cd36 / Atcc Mya-646 / Cbs 7987 / Ncpf 3949 / Nrrl Y-17841) | AKREPIHDNSIRTEWEAKIAKLTSVDQATKFIQDFRLAYTSPFRKSYDIDVDYQYIERKIEEKLSVLKTEKLPVADLITKATTGEDAAAVEATWIAKIKAAKSKYEAERIHIEFRQLYKPPVLPVNVFLRTDAALGTVLMEIRNTDYYGTPLEGLRKERGVKVLHLQA |
Methane monooxygenase regulatory protein B | D | 131 | Candida Dubliniensis (Strain Cd36 / Atcc Mya-646 / Cbs 7987 / Ncpf 3949 / Nrrl Y-17841) | SAHNAYNAGIMQKTGKAFADEFFAEENQVVHESNAVVLVLMKSDEIDAIIEDIVLKGGKAKNPSIVVEDKAGFWWIKADGAIEIDAAEAGELLGKPFSVYDLLINVASAVGRAYTLGTKFTITSELMGLDR |
Methane monooxygenase regulatory protein B | H | 131 | Candida Dubliniensis (Strain Cd36 / Atcc Mya-646 / Cbs 7987 / Ncpf 3949 / Nrrl Y-17841) | SAHNAYNAGIMQKTGKAFADEFFAEENQVVHESNAVVLVLMKSDEIDAIIEDIVLKGGKAKNPSIVVEDKAGFWWIKADGAIEIDAAEAGELLGKPFSVYDLLINVASAVGRAYTLGTKFTITSELMGLDR |
Method: X-RAY DIFFRACTION
Deposited Date: 2021-09-16 Deposition Author(s): Aihara, H. , Banerjee, R. , Johns, J.C. , Lipscomb, J.D. , Semonis, M.M. , Shi, K.