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FASTA Sequence PDB Format mmCIF Format
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7S6H

Human parp1 deltav687-e688 bound to nad+ analog eb-47 and to a dna double strand break.

PDB DOI: 10.2210/pdb7s6h/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2021-09-14
Deposition Author(s): Pascal, J.M. , Rouleau-Turcotte, E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.1 Å

7s6h
Literature

Human parp1 deltav687-e688 bound to nad+ analog eb-47 and to a dna double strand break.

Pascal, J.M. , Rouleau-Turcotte, E.

Primary Citation of Related Structures: 7S6H


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*GP*AP*CP*G)-3') m 5 NA CGACG
DNA (5'-D(*CP*GP*AP*CP*G)-3') e 5 NA CGACG
DNA (5'-D(*CP*GP*TP*CP*G)-3') n 5 NA CGTCG
DNA (5'-D(*CP*GP*TP*CP*G)-3') f 5 NA CGTCG

Proteins
Molecule Chains Sequence Length Organism Sequence
Poly [ADP-ribose] polymerase 1 B 504 Homo Sapiens , Synthetic Construct MKSEKRMKLTLKGGAAVDPDSGLEHSAHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLEDDKENRYWIFRSWGRVGTVIGSNKLEQMPSKEDAIEHFMKLYEEKTGNAWHSKNFTKYPKKFYPLEIDYGQDEEAVKKLTVNPGTKSKLPKPVQDLIKMIFDVESMKKAMYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKAEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEIIRKYVKNTHATTHNAYDLEVIDIFKIEREGECQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDPSANISLDGVDVPLGTGISSGVNDTSLLYNEYIVYDIAQVNLKYLLKLKFNFKTSLWLEHHHHHH
Poly [ADP-ribose] polymerase 1 D 504 Homo Sapiens , Synthetic Construct MKSEKRMKLTLKGGAAVDPDSGLEHSAHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLEDDKENRYWIFRSWGRVGTVIGSNKLEQMPSKEDAIEHFMKLYEEKTGNAWHSKNFTKYPKKFYPLEIDYGQDEEAVKKLTVNPGTKSKLPKPVQDLIKMIFDVESMKKAMYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKAEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEIIRKYVKNTHATTHNAYDLEVIDIFKIEREGECQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDPSANISLDGVDVPLGTGISSGVNDTSLLYNEYIVYDIAQVNLKYLLKLKFNFKTSLWLEHHHHHH
Fusion of human PARP1 zinc fingers 1 and 3 (Zn1, Zn3) A 276 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRHPDVEVDGFSELRWDDQQKVKKTAEAGGVTGKRKGDEVDGVDEVAKKKSKKEKDKDSKLEKALKAQNDLIWNIKDELKKVCSTNDLKELLIFNKQQVPSGESAILDRVADGMVFGALLPCEECSGQLVFKSDAYYCTGDVTAWTKCMVKTQTPNRKEWVTPKEFREISYLKKLKVKKQDRIFPPETSASVA
Fusion of human PARP1 zinc fingers 1 and 3 (Zn1, Zn3) C 276 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRHPDVEVDGFSELRWDDQQKVKKTAEAGGVTGKRKGDEVDGVDEVAKKKSKKEKDKDSKLEKALKAQNDLIWNIKDELKKVCSTNDLKELLIFNKQQVPSGESAILDRVADGMVFGALLPCEECSGQLVFKSDAYYCTGDVTAWTKCMVKTQTPNRKEWVTPKEFREISYLKKLKVKKQDRIFPPETSASVA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-09-14
Deposition Author(s): Pascal, J.M. , Rouleau-Turcotte, E.