7S6B
Crystal structure of modular polyketide synthase apo-lsd14 from the lasalocid biosynthesis pathway, trapped in the transacylation step
PDB DOI: 10.2210/pdb7s6b/pdb
Classification: BIOSYNTHETIC PROTEIN Organism(s): Streptomyces Lasalocidi
Deposited: 2021-09-13 Deposition Author(s): Bagde, S.R. , Kim, C.-Y. , Mathews, I.I.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.35 Å
Crystal structure of modular polyketide synthase apo-lsd14 from the lasalocid biosynthesis pathway, trapped in the transacylation step
Bagde, S.R. , Kim, C.-Y. , Mathews, I.I.
Primary Citation of Related Structures: 7S6B
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Polyketide synthase | A | 944 | Streptomyces Lasalocidi | MGSSHHHHHHSSGLVPRGSHMADVVNTEDRLRDYLKRATADLSRVRRQLQETEAASREPIAIIGMACRLPGGVDSPEGLWELVDSGTDAIAGFPLDRGWDVEGMYDPDAEAPGKTYVKEAGFLYDAGEFDAGFFGISPREAVSMDPQQRLMLEASWEAFERAGLDPARQRGTATGVFVGATATGYVSPAAEVPEGAEGFAITGNMTAVTSGRISYTLGLQGPAVTIDTACSSSLVALHLACQSLRQGECTTALAGGVTVMPTPTAFTEFSRQRGLAPDGRCKSFAAAADGTNWAEGVAVLVVERLSDARRNGHRVLAVVRGTAINQDGASNGLSAPNDLAQERVIRSALDNAGLTASDVDAVEAHGTGTTLGDPIEAQALLAAYGHERPAHRPLRVGSLKSNIGHAGPAAGVAGVIKMVMAMRHGVLPRSLHIDEPTPQVDWSSGAVTLLTEPVDWPDSDRPRRAGVSAFGISGTNAHVILEQAPTQDPQQPAPPVPAAPWLLSAKTPAALRAQARRLHTHLARHPHPDPTDIAHALATTRTPHEHRAALVTDDHGTRGPALAALAEGAPDACLISGTALSKGRTVFVFPGQGSQWTGMGRELLHTSPEFAAYIAECETALNDFVDWSLTDVLRGTEGAPGYDRVDVVQPALFAVMVSLARLWQHHGIHPDAVIGHSQGEIAAAHIAGALSLQDAARIVALRSQALLPLAGLGGMTSLALPHDQALQLIQPWGQDLSIASVNGPHSTVVSGTTHALDELHTTCDTQGVRARRIPVDYASHSAQVESIRDTVLQAATGINPQPTTIPLYSTVTGQPIDGTQLDADYWYTNLRHTVRFEETTRALLGSGHRHFIETTAHPVLALALEETIEATGSDARVTGTLRRDHGDLTQLHTALATAWTHGIDVDWTAVLGDRRTPFELPTYAFQRQRYWLEPGAGVGVPVGG |
| Polyketide synthase | B | 944 | Streptomyces Lasalocidi | MGSSHHHHHHSSGLVPRGSHMADVVNTEDRLRDYLKRATADLSRVRRQLQETEAASREPIAIIGMACRLPGGVDSPEGLWELVDSGTDAIAGFPLDRGWDVEGMYDPDAEAPGKTYVKEAGFLYDAGEFDAGFFGISPREAVSMDPQQRLMLEASWEAFERAGLDPARQRGTATGVFVGATATGYVSPAAEVPEGAEGFAITGNMTAVTSGRISYTLGLQGPAVTIDTACSSSLVALHLACQSLRQGECTTALAGGVTVMPTPTAFTEFSRQRGLAPDGRCKSFAAAADGTNWAEGVAVLVVERLSDARRNGHRVLAVVRGTAINQDGASNGLSAPNDLAQERVIRSALDNAGLTASDVDAVEAHGTGTTLGDPIEAQALLAAYGHERPAHRPLRVGSLKSNIGHAGPAAGVAGVIKMVMAMRHGVLPRSLHIDEPTPQVDWSSGAVTLLTEPVDWPDSDRPRRAGVSAFGISGTNAHVILEQAPTQDPQQPAPPVPAAPWLLSAKTPAALRAQARRLHTHLARHPHPDPTDIAHALATTRTPHEHRAALVTDDHGTRGPALAALAEGAPDACLISGTALSKGRTVFVFPGQGSQWTGMGRELLHTSPEFAAYIAECETALNDFVDWSLTDVLRGTEGAPGYDRVDVVQPALFAVMVSLARLWQHHGIHPDAVIGHSQGEIAAAHIAGALSLQDAARIVALRSQALLPLAGLGGMTSLALPHDQALQLIQPWGQDLSIASVNGPHSTVVSGTTHALDELHTTCDTQGVRARRIPVDYASHSAQVESIRDTVLQAATGINPQPTTIPLYSTVTGQPIDGTQLDADYWYTNLRHTVRFEETTRALLGSGHRHFIETTAHPVLALALEETIEATGSDARVTGTLRRDHGDLTQLHTALATAWTHGIDVDWTAVLGDRRTPFELPTYAFQRQRYWLEPGAGVGVPVGG |
| Polyketide synthase | C | 544 | Streptomyces Lasalocidi | TSAEARFWDAVEDEDLEALVAAIGADGDDASWAGVLPALAGWRRRQREQSALDDLRYKVTWKPTAVADGASATGTWLVVVPESLAGGGWPVVVARAVDQAGGRPVVLSVDAADGADRSRLGLRIHEALGEGPVPDAVVSLLALDPSALPGLPDVPQALASTAALVQALLDLGLEARLWCVTSGAVSVSGADGPSAPEQAAVWGFGRVAGLEHPHLWAGLVDLPPEADERTAARLVGVLAGAGGEDQVALRSSGVFVRRLVRAPASEVPAVRSWKPGGTVLVTGGTGGLGRQVARWLARGGADHLLLVSRRGVDAPGADELVDELTDLGARVTVAACDVADRDAVQRLLSEQVPSDAPLTAVIHTAAVLDDGVIDSLSPERMEQVLRVKVGGAVHLYELTRESDLSAFVLFSSFGSTFGLPGLGNYAPGNAALEALAEQWRAEGRPATAVGWGTWAGGGMADGGVGERGRTHGIHELEPALATAALEQALERDESSPVIIDIDWERFAVAFHAKRPTRGFELVPEAQAALEAADGGPGPDGGAGD |
| Polyketide synthase | D | 544 | Streptomyces Lasalocidi | TSAEARFWDAVEDEDLEALVAAIGADGDDASWAGVLPALAGWRRRQREQSALDDLRYKVTWKPTAVADGASATGTWLVVVPESLAGGGWPVVVARAVDQAGGRPVVLSVDAADGADRSRLGLRIHEALGEGPVPDAVVSLLALDPSALPGLPDVPQALASTAALVQALLDLGLEARLWCVTSGAVSVSGADGPSAPEQAAVWGFGRVAGLEHPHLWAGLVDLPPEADERTAARLVGVLAGAGGEDQVALRSSGVFVRRLVRAPASEVPAVRSWKPGGTVLVTGGTGGLGRQVARWLARGGADHLLLVSRRGVDAPGADELVDELTDLGARVTVAACDVADRDAVQRLLSEQVPSDAPLTAVIHTAAVLDDGVIDSLSPERMEQVLRVKVGGAVHLYELTRESDLSAFVLFSSFGSTFGLPGLGNYAPGNAALEALAEQWRAEGRPATAVGWGTWAGGGMADGGVGERGRTHGIHELEPALATAALEQALERDESSPVIIDIDWERFAVAFHAKRPTRGFELVPEAQAALEAADGGPGPDGGAGD |
| Polyketide synthase | E | 179 | Streptomyces Lasalocidi | PSELLDRLAALPDAERDRALLEVVRGNAASVMSHGAMRTATLEAVEPTRAFRDLGFDSLMAVELRNRIGAATGLRLAPTLVFDHPTPEAVVRHLRAELGLEGDGAPDPVFDELDGLERALSSYTPDTDTRVKITKRLESLLWEWTRSEADAPDPVDAADLAAVSDDEMFELIDRELGSA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2021-09-13 Deposition Author(s): Bagde, S.R. , Kim, C.-Y. , Mathews, I.I.