7S3H
Cas9:sgrna:dna (s. pyogenes) with 0 rna:dna base pairs, open-protein/linear-dna conformation
PDB DOI: 10.2210/pdb7s3h/pdb
Classification: HYDROLASE/RNA/DNA Organism(s): Streptococcus Pyogenes Serotype M1 , Synthetic Construct
Deposited: 2021-09-06 Deposition Author(s): Cofsky, J.C. , Doudna, J.A. , Knott, G.J. , Nogales, E. , Soczek, K.M.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.5 Å
Cas9:sgrna:dna (s. pyogenes) with 0 rna:dna base pairs, open-protein/linear-dna conformation
Cofsky, J.C. , Doudna, J.A. , Knott, G.J. , Nogales, E. , Soczek, K.M.
Primary Citation of Related Structures: 7S3H
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Non-target DNA strand | n | 30 | NA | GACGCATAAAGATGAGACAATGGCGATTAC |
| Single-guide RNA | r | 102 | NA | GGCUGCGUAUUUCUACUCUGUUGUUUUAGAGCUAGAAAUAGCAAGUUAAAAUAAGGCUAGUCCGUUAUCAACUUGAAAAAGUGGCACCGAGUCGGUGCUUCG |
| Target DNA strand | t | 30 | NA | GTAATXGCCATTGTCTCATCTTTATGCGTC |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CRISPR-associated endonuclease Cas9/Csn1 | P | 1371 | Streptococcus Pyogenes Serotype M1 , Synthetic Construct | SNAMDKKYSIGLDIGTNSVGWAVITDEYKVPSKKFKVLGNTDRHSIKKNLIGALLFDSGETAEATRLKRTARRRYTRRKNRICYLQEIFSNEMAKVDDSFFHRLEESFLVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLVDSTDKADLRLIYLALAHMIKFRGHFLIEGDLNPDNSDVDKLFIQLVQTYNQLFEENPINASGVDAKAILSARLSKSRRLENLIAQLPGEKKNGLFGNLIALSLGLTPNFKSNFDLAEDAKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRVNTEITKAPLSASMIKRYDEHHQDLTLLKALVRQQLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLVKLNREDLLRKQRTFDNGSIPHQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGNSRFAWMTRKSEETITPWNFEEVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYFTVYNELTKVKYVTEGMRKPAFLSGEQKKAIVDLLFKTNRKVTVKQLKEDYFKKIECFDSVEISGVEDRFNASLGTYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDREMIEERLKTYAHLFDDKVMKQLKRRRYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFMQLIHDDSLTFKEDIQKAQVSGQGDSLHEHIANLAGSPAIKKGILQTVKVVDELVKVMGRHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSQILKEHPVENTQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDHIVPQSFLKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWRQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTKYDENDKLIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYPKLESEFVYGDYKVYDVRKMIAKSEQEIGKATAKYFFYSNIMNFFKTEITLANGEIRKRPLIETNGETGEIVWDKGRDFATVRKVLSMPQVNIVKKTEVQTGGFSKESILPKRNSDKLIARKKDWDPKKYGGFDSPTVAYSVLVVAKVEKGKSKKLKSVKELLGITIMERSSFEKNPIDFLEAKGYKEVKKDLIIKLPKYSLFELENGRKRMLASAGELQKGNELALPSKYVNFLYLASHYEKLKGSPEDNEQKQLFVEQHKHYLDEIIEQISEFSKRVILADANLDKVLSAYNKHRDKPIREQAENIIHLFTLTNLGAPAAFKYFDTTIDRKRYCSTKEVLDATLIHQSITGLYETRIDLSQLGGD |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-09-06 Deposition Author(s): Cofsky, J.C. , Doudna, J.A. , Knott, G.J. , Nogales, E. , Soczek, K.M.