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7S3D
Structure of photosystem i with bound ferredoxin from synechococcus sp. pcc 7335 acclimated to far-red light
PDB DOI: 10.2210/pdb7s3d/pdb
Classification: PHOTOSYNTHESIS Organism(s): Synechococcus Sp. Pcc 7335
Deposited: 2021-09-05 Deposition Author(s): Brudvig, G.W. , Bryant, D.A. , Flesher, D.A. , Gisriel, C.J. , Ho, M. , Shen, G. , Wang, J.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.91 Å
Structure of photosystem i with bound ferredoxin from synechococcus sp. pcc 7335 acclimated to far-red light
Brudvig, G.W. , Bryant, D.A. , Flesher, D.A. , Gisriel, C.J. , Ho, M. , Shen, G. , Wang, J.
Primary Citation of Related Structures: 7S3D
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Photosystem I P700 chlorophyll a apoprotein A1 | A | 782 | Synechococcus Sp. Pcc 7335 | MTASPPKRNQASAATEQSPIPTSFERWAKPGHFDRTLARGPKTTTWIWNLHADAHDFDSHTNDLQDISRKIFSAHFGHLAVVFVWLSGMYFHGARFSNFSSWMADPTHIRPSAQVVWPLVGQDILNGDMGGGFRGIQITSGLFQMWRGEGFTNEFQLYCTAIGALVMAGLMIFAGWFHYHVRSPKLEWFQNVQSMLNHHLAGLLGLGSLGWAGHLIHVALPTNKLLDAGVAPQDIPLPHEFVLDKALMAELYPSFAQGIRPFFTLNWATYSDFLTFNGGLNPVTGGLWMTDIAHHHVAIAVLFIFAGHMYRTNWGIGHSIRTMLEDARHPKMLPFLSFIGPVGHRGLFEVLTTSWHAQLSINLAMMGSLSIIVAQHMYSMPPYPYLATDYGTVTSLFTHHMWIGGFLIVGAAAHAGIFMVRDYDPAENVNNVLDRVLRHRDAIISHLVWVCQFLGFHSFAMYCHNDTMRAFGRPQDMFSDTGIQLQPIFAQWVQHIQTMAVGSAQVAEPLGDALGGIQNIALSGVGTTAPGVASPASYAFGGGLVAVGGKVAMMPISLGTADFLIHHIHAFTIHVTVLVLLKGVLFARNSRLIPDKSELGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSIAMVIFHFFWKMQSDVWGAVDANGTVSHITGGNFAQSSITINGWLRDFLWAQATQVISSYGSALSAYGLMFLAGHFVFAFSLMFLFSGRGYWQELIESIVWAHNKLRITTAIQPRALSITQGRAVGAAHYLLGSIVTTWAFFLARMAAIG |
| Photosystem I P700 chlorophyll a apoprotein A1 | G | 782 | Synechococcus Sp. Pcc 7335 | MTASPPKRNQASAATEQSPIPTSFERWAKPGHFDRTLARGPKTTTWIWNLHADAHDFDSHTNDLQDISRKIFSAHFGHLAVVFVWLSGMYFHGARFSNFSSWMADPTHIRPSAQVVWPLVGQDILNGDMGGGFRGIQITSGLFQMWRGEGFTNEFQLYCTAIGALVMAGLMIFAGWFHYHVRSPKLEWFQNVQSMLNHHLAGLLGLGSLGWAGHLIHVALPTNKLLDAGVAPQDIPLPHEFVLDKALMAELYPSFAQGIRPFFTLNWATYSDFLTFNGGLNPVTGGLWMTDIAHHHVAIAVLFIFAGHMYRTNWGIGHSIRTMLEDARHPKMLPFLSFIGPVGHRGLFEVLTTSWHAQLSINLAMMGSLSIIVAQHMYSMPPYPYLATDYGTVTSLFTHHMWIGGFLIVGAAAHAGIFMVRDYDPAENVNNVLDRVLRHRDAIISHLVWVCQFLGFHSFAMYCHNDTMRAFGRPQDMFSDTGIQLQPIFAQWVQHIQTMAVGSAQVAEPLGDALGGIQNIALSGVGTTAPGVASPASYAFGGGLVAVGGKVAMMPISLGTADFLIHHIHAFTIHVTVLVLLKGVLFARNSRLIPDKSELGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSIAMVIFHFFWKMQSDVWGAVDANGTVSHITGGNFAQSSITINGWLRDFLWAQATQVISSYGSALSAYGLMFLAGHFVFAFSLMFLFSGRGYWQELIESIVWAHNKLRITTAIQPRALSITQGRAVGAAHYLLGSIVTTWAFFLARMAAIG |
| PSI subunit V | L | 174 | Synechococcus Sp. Pcc 7335 | MSASDAYISDDPIQPYQGNPQLGNLATPINSSNLAKAFINNLPAYRPGLTPFLRGLEIGMAHGYFLVGPEVVFGPLKEGSHGANLSGLITAIYITVSACLGISIFALATFQGDPRGTYNSHSRDRLRPLRKKEDWYQLSGGILMGSLGGAIFAYALLENFELLDSILRGAVNVG |
| PSI subunit V | U | 174 | Synechococcus Sp. Pcc 7335 | MSASDAYISDDPIQPYQGNPQLGNLATPINSSNLAKAFINNLPAYRPGLTPFLRGLEIGMAHGYFLVGPEVVFGPLKEGSHGANLSGLITAIYITVSACLGISIFALATFQGDPRGTYNSHSRDRLRPLRKKEDWYQLSGGILMGSLGGAIFAYALLENFELLDSILRGAVNVG |
| PsaM | M | 31 | Synechococcus Sp. Pcc 7335 | MALSDSQIFLALALALIPGFLALRLATELYK |
| PsaM | V | 31 | Synechococcus Sp. Pcc 7335 | MALSDSQIFLALALALIPGFLALRLATELYK |
| 2Fe-2S ferredoxin-type domain-containing protein | X | 99 | Synechococcus Sp. Pcc 7335 | MASYKVTLVNETENLNTTIEVADDEYILDAAEEQGIDLPYSCRAGACSTCAGKLTEGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTVMTHQEEELY |
| 2Fe-2S ferredoxin-type domain-containing protein | W | 99 | Synechococcus Sp. Pcc 7335 | MASYKVTLVNETENLNTTIEVADDEYILDAAEEQGIDLPYSCRAGACSTCAGKLTEGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTVMTHQEEELY |
| Photosystem I P700 chlorophyll a apoprotein A2 | B | 743 | Synechococcus Sp. Pcc 7335 | MATKFPKFSQELQQDPTTRRIFYSLATAHDFESHDGMTEESLYQRIFASHFGHLAIIFLWTSGILFHVAWQGNFEAWIKDPLNISPIAHAIWDPQFGPAAMDAFTPAGAGNPVNFCYSGVYHWWYTIGLRTNGDLFAGAMFLLLLAAVMLYAGWLHLQPRYRPSLAWFKNAESRLNHHLAGLFGVSSLAWTGHLVHVAIPESRGQHVGWDNFLSMPPHPEGLKPFFTGNWGAYALNPDTSEHLFNTSQGAGTAILTFLGGFHPQTESLWLTDMAHHHLAIAVIFIIAGHMYRTNFGIGHSIKEMTESLQGPGWTGFFIAPNTGRGHKGIYDAYNNSLHFQLGWHLACLGVVTSLVAQHMYAMPPYAFIARDYTTTAALYTHHQYIAGFLMLGAFAHGGIFLIRDYDPVANENNVLARVLDHKEAIISHLSWVSLFLGFHTLALYVHNDCEVAFGSPDKQILVEPVFAQWIQAVHGKALYGISSLLSNPDSIASTAWPNHANVWLPGWLEAINNGTNSLFLAIGPGDFLVHHAIALGLHVTTLILVKGALDARGSKLMPDKKDFGYAFPCDGPGRGGTCDISAWDSVYLATFWMLNTLGWVTFYWHWKHLAIWSGNVAQFNEGSTYLMGWFRDYLWLNSAQLINGYNPYGTNNLAIWAWIFLFGHLVWAISFMFLITWRGYWQELIETLMWAHENTPLSFGYPKDKPVALSIVQARLVGLVHFTVGYIATYGAFLIASTGSRFP |
| Photosystem I P700 chlorophyll a apoprotein A2 | H | 743 | Synechococcus Sp. Pcc 7335 | MATKFPKFSQELQQDPTTRRIFYSLATAHDFESHDGMTEESLYQRIFASHFGHLAIIFLWTSGILFHVAWQGNFEAWIKDPLNISPIAHAIWDPQFGPAAMDAFTPAGAGNPVNFCYSGVYHWWYTIGLRTNGDLFAGAMFLLLLAAVMLYAGWLHLQPRYRPSLAWFKNAESRLNHHLAGLFGVSSLAWTGHLVHVAIPESRGQHVGWDNFLSMPPHPEGLKPFFTGNWGAYALNPDTSEHLFNTSQGAGTAILTFLGGFHPQTESLWLTDMAHHHLAIAVIFIIAGHMYRTNFGIGHSIKEMTESLQGPGWTGFFIAPNTGRGHKGIYDAYNNSLHFQLGWHLACLGVVTSLVAQHMYAMPPYAFIARDYTTTAALYTHHQYIAGFLMLGAFAHGGIFLIRDYDPVANENNVLARVLDHKEAIISHLSWVSLFLGFHTLALYVHNDCEVAFGSPDKQILVEPVFAQWIQAVHGKALYGISSLLSNPDSIASTAWPNHANVWLPGWLEAINNGTNSLFLAIGPGDFLVHHAIALGLHVTTLILVKGALDARGSKLMPDKKDFGYAFPCDGPGRGGTCDISAWDSVYLATFWMLNTLGWVTFYWHWKHLAIWSGNVAQFNEGSTYLMGWFRDYLWLNSAQLINGYNPYGTNNLAIWAWIFLFGHLVWAISFMFLITWRGYWQELIETLMWAHENTPLSFGYPKDKPVALSIVQARLVGLVHFTVGYIATYGAFLIASTGSRFP |
| PsaC | C | 81 | Synechococcus Sp. Pcc 7335 | MSHSVKIYDTCIGCTQCVRACPTDVLEMVPWDGCRAGQIAASPRTEDCVGCKRCETACPTDFLSIRVYLGAETSRSMGLAY |
| PsaC | N | 81 | Synechococcus Sp. Pcc 7335 | MSHSVKIYDTCIGCTQCVRACPTDVLEMVPWDGCRAGQIAASPRTEDCVGCKRCETACPTDFLSIRVYLGAETSRSMGLAY |
| Photosystem I 16 kDa polypeptide | D | 155 | Synechococcus Sp. Pcc 7335 | MALTGSMPKFGGSTGGLLTAAFVEERYAITWTSSKEQVFEMPTGGAATMNEGENLLELARKEQCLALGAQLRTKFKPKITDYKIYRIFPNGETTFIHPADGVFPEKVNEGRGYSGKKDRRIGENPNPATIKFSGQNTFETDMKSTDVKTTGLPRP |
| Photosystem I 16 kDa polypeptide | O | 155 | Synechococcus Sp. Pcc 7335 | MALTGSMPKFGGSTGGLLTAAFVEERYAITWTSSKEQVFEMPTGGAATMNEGENLLELARKEQCLALGAQLRTKFKPKITDYKIYRIFPNGETTFIHPADGVFPEKVNEGRGYSGKKDRRIGENPNPATIKFSGQNTFETDMKSTDVKTTGLPRP |
| Photosystem I reaction center subunit IV | E | 71 | Synechococcus Sp. Pcc 7335 | MVQRGSKVRILRPESYWFREVGSVASVDQSGIKYPVVVRFSKVNYAGVNTNNFSEAELVEVEAPPKKAAKK |
| Photosystem I reaction center subunit IV | P | 71 | Synechococcus Sp. Pcc 7335 | MVQRGSKVRILRPESYWFREVGSVASVDQSGIKYPVVVRFSKVNYAGVNTNNFSEAELVEVEAPPKKAAKK |
| PSI-F | F | 168 | Synechococcus Sp. Pcc 7335 | MHKTIRKFFSLLLAAFVWLSVVSPAVAASEGYTDTHLVPCASSPAFNERMQNAPEGYYFDTPYQSYAANLLCGAEGLPHQQLRFDRAIDVLIPFGIFFYVAGFIGWSGRAYLISSNRNSKPEETEIFIDVALAIKSFVQGLLWPLLAVKELTTGELTAPVSEVSVSPR |
| PSI-F | Q | 168 | Synechococcus Sp. Pcc 7335 | MHKTIRKFFSLLLAAFVWLSVVSPAVAASEGYTDTHLVPCASSPAFNERMQNAPEGYYFDTPYQSYAANLLCGAEGLPHQQLRFDRAIDVLIPFGIFFYVAGFIGWSGRAYLISSNRNSKPEETEIFIDVALAIKSFVQGLLWPLLAVKELTTGELTAPVSEVSVSPR |
| PsaI2 | I | 70 | Synechococcus Sp. Pcc 7335 | MVDATQLEGAYAAAWLPWIMIPMITYILPFPIFAIAFLWIEREGGEGGLDIDVMGSNAMSNEAMGRDISS |
| PsaI2 | R | 70 | Synechococcus Sp. Pcc 7335 | MVDATQLEGAYAAAWLPWIMIPMITYILPFPIFAIAFLWIEREGGEGGLDIDVMGSNAMSNEAMGRDISS |
| Photosystem I reaction center subunit IX | J | 46 | Synechococcus Sp. Pcc 7335 | MKYFAKYLTSAPIMATVALVSLSVVLIELNHFFPGLQYGTYFHSVP |
| Photosystem I reaction center subunit IX | S | 46 | Synechococcus Sp. Pcc 7335 | MKYFAKYLTSAPIMATVALVSLSVVLIELNHFFPGLQYGTYFHSVP |
| Photosystem I reaction center subunit PsaK | K | 84 | Synechococcus Sp. Pcc 7335 | MLSLVAAAGVVPNTVTWGPNVAIVMIICNLIAFAIGKQVIQIPDAGPAPGTFLGLGLPALLGVTSLGHAIGVGAILGLANIGVL |
| Photosystem I reaction center subunit PsaK | T | 84 | Synechococcus Sp. Pcc 7335 | MLSLVAAAGVVPNTVTWGPNVAIVMIICNLIAFAIGKQVIQIPDAGPAPGTFLGLGLPALLGVTSLGHAIGVGAILGLANIGVL |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-09-05 Deposition Author(s): Brudvig, G.W. , Bryant, D.A. , Flesher, D.A. , Gisriel, C.J. , Ho, M. , Shen, G. , Wang, J.